Polynucleobacter sp. SHI8: PSHI8_12180
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Entry
PSHI8_12180 CDS
T10387
Name
(GenBank) cytosine-specific methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln00270
Cysteine and methionine metabolism
poln01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PSHI8_12180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
poln03000
]
PSHI8_12180
03032 DNA replication proteins [BR:
poln03032
]
PSHI8_12180
03036 Chromosome and associated proteins [BR:
poln03036
]
PSHI8_12180
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
poln02048
]
PSHI8_12180
Enzymes [BR:
poln01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
PSHI8_12180
Transcription factors [BR:
poln03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
PSHI8_12180
DNA replication proteins [BR:
poln03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
PSHI8_12180
Chromosome and associated proteins [BR:
poln03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
PSHI8_12180
Prokaryotic defense system [BR:
poln02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
PSHI8_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
BDW13582
LinkDB
All DBs
Position
complement(1238227..1239330)
Genome browser
AA seq
367 aa
AA seq
DB search
MATRIKNIKFRLGELFCGPGGIAVGASGAVVLKGSTRYSIEHTWASDYHEDTCKTYEVNF
PGVKVVCEDVKKLKIDSLGDIDAFAYGFPCNDFSIVGESKGFDGDFGGLYKFGIKVLNKY
NPKFFIAENVGGLTSANEGKALKKIVHDLERAGDNGYDLTIHKYKFEEYGVPQTRHRIII
VGIDKKLGIKYRVPSPTTSEKYITTREALESPPIPLDAHNNEKMGQSATVVERLKYIKAG
NNIWQTDLPEHLRLNVKGAKLSQIYKRLDPNKPSYTITGSGGGGTHGYHYKEHRALTNRE
RARIQTFPDDFLFIGKNDSVRRQIGMAVPPKGIQIIFESVLKSFAKIEYDSIDASILDSS
VDQSDLI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtggctactagaatcaaaaatataaaatttagacttggtgaattgttctgtggaccaggt
ggaattgctgttggggcatcaggtgctgtagtattaaaaggaagtactagatactcaata
gaacatacttgggcatctgattatcatgaagacacttgtaagacatatgaagttaacttt
ccgggagttaaagtagtatgtgaagatgttaaaaaattaaaaatagattctcttggtgat
attgatgcgtttgcttatggatttccatgtaatgattttagtatagttggtgagagcaaa
ggttttgatggtgattttggtggtttatataagttcggtataaaagtactaaacaaatat
aatcctaagttctttatcgctgaaaatgttggtggtttaacaagtgctaatgaaggcaaa
gcattaaagaaaatagttcatgacttagagagagctggtgacaatggttatgacttgact
attcacaaatataaatttgaagagtacggtgtacctcaaactaggcacagaataattatt
gttggtattgataaaaagttaggtatcaagtacagagtaccttctccaactacttcagaa
aaatatataacaactagagaggctttagagagtccaccaataccattagatgctcacaat
aatgaaaaaatgggtcaaagtgctacagtggttgagcgattaaaatacattaaggccggt
aataatatttggcaaactgatttaccagaacatttaagattaaatgtaaagggagctaag
ctaagtcaaatatataaacgactagatccaaataagccgtcatatacaattactggtagt
ggaggtggcggtacacatggatatcattacaaagagcatagagcacttactaatagagaa
agagcaagaatacaaacttttcccgatgactttcttttcataggtaagaatgatagtgtt
agaagacaaataggtatggcggtacctccaaaaggtattcaaataatttttgagtcagta
cttaaatcttttgcgaaaattgaatacgattcaattgatgcgagtattttagattctagt
gtcgatcaatccgatttaatttag
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