Polynucleobacter sp. SHI8: PSHI8_13610
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Entry
PSHI8_13610 CDS
T10387
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
poln Polynucleobacter sp. SHI8
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poln03009
]
PSHI8_13610
Enzymes [BR:
poln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PSHI8_13610
Ribosome biogenesis [BR:
poln03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSHI8_13610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
tify
Motif
Other DBs
NCBI-ProteinID:
BDW13725
LinkDB
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Position
complement(1381328..1383100)
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AA seq
590 aa
AA seq
DB search
MTENDIPDGAPKLPKMESSEQTAVSDQTSTGAQEGAASTEPRRPRNPRFGRKGGKFGPKR
PRPEDGTQEPIQASEDGPSTPKSNRHRPASRGPHARASASNKPNPIKEQSEMLFAQVVSG
EFDAILETPEKPEASLNGEMSDDQSQAVIVDPSLKALEDAQSRDWKEDHDGESSESDEPI
QQYQFANVNELPMSMRDEVWSDLDGLDDDVEDEDTVKLHKVLADAGMGSRREMEDLIIQG
RVSVNSMPAHIGQRIGATDQVRINGKLVHRKIQTKPPRVLMYHKPTGEIVSQSDPEGRPT
VFDRLPKAKNGRWIAVGRLDFNTEGLLLFTTSGELANRLMHPRYGIEREYAVRIFGELEH
EQTQLLKNGVTLEDGVAKFLRLADGGGDGSNRWYHVALTEGKNREVRRMFEAVGHMVSRL
IRTRYGIFVLPPRLRRGQFDEVPADQVVQLMKMAGLKTANLALSGTGKPHQRGQDRQQDS
HGQPDPMQTSVSYWGSREALKMADGRLGLTQHKSGQNGQTGNGHHPSGAKKNGRSNQGRP
GARVSHEHGFAGATGNGGPNPRNARNSKNTKNRPKSNFKGPRPKKSSDLG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacgacatacctgatggtgcaccaaagttgcctaaaatggagtcatcagag
caaactgcagtttcagatcagacttctactggagctcaagagggtgcagcaagcacagaa
cctaggcgtccaagaaatcctcgatttggtcgcaagggtggtaagtttgggcctaaaaga
ccgcggcctgaagatggtacccaagagccaattcaagcatctgaagacggcccatcaacc
cctaaatcgaatcgacatcggcctgcgagcagagggccacatgcaagagcttctgcaagt
aataaacctaacccgatcaaagaacaaagtgagatgttgtttgctcaggttgtctcgggg
gagtttgatgcgattttagaaaccccagaaaagccggaagcctcattgaatggtgaaatg
agtgatgatcaatcccaagcagtgattgttgatccaagtttaaaagccctagaagatgct
cagtcgcgagactggaaagaggatcacgatggcgagtcatccgaatcagatgagccaatt
cagcaataccaatttgcaaatgtcaatgaattaccaatgtcgatgcgagacgaagtttgg
tcagatctcgatggcttagatgatgatgttgaagacgaagataccgttaaattacataaa
gtactagctgatgctggtatgggatcgcgtcgagaaatggaagatttaataatacaaggg
cgagtttccgtcaatagtatgccggcgcatattggacaacgtattggtgcaactgatcaa
gttcgcattaatggcaaactggtacatcgtaaaattcagactaaacctcctagggtattg
atgtatcacaaacctactggcgagattgttagtcagtccgatccagaagggcgtcctaca
gtatttgatcgtttacccaaggctaaaaatggccgatggattgcagtaggtcgtctagac
ttcaataccgaaggactgttactgtttaccacctcaggtgagttagctaatcgactcatg
cacccaagatatggcattgagagggagtatgcagttcgtatttttggtgaactagagcat
gagcaaacgcaactcttaaaaaatggtgtgactctagaagacggtgtggctaaattttta
cgacttgcagatggtgggggtgatggatccaatcgttggtatcacgttgctttgacagag
ggtaaaaatcgcgaagttcgaagaatgtttgaagcggttggtcacatggtgtcgcggtta
attcgaacaagatacggtatatttgtgcttcctcctcgcttgagaagagggcaatttgat
gaagtaccagcggatcaagttgtgcaactgatgaagatggctggtttaaaaactgctaat
ttagccctttccggaacaggtaagcctcaccaacggggtcaagatcgtcagcaagatagt
catggtcagcctgaccctatgcagacgtctgtgtcttattgggggtctagagaagccctc
aagatggcagacggtcgtttaggccttacgcagcacaaaagcggtcaaaatggtcaaacc
ggtaatggtcaccatccttctggagcaaagaaaaatggtcgaagtaatcaaggtcgacct
ggtgcgagggtttctcacgagcatggatttgcaggagcaactggaaatggcggtcccaat
ccgcgtaatgctaggaattcaaaaaatacaaaaaatcgacctaagtctaactttaaaggt
cctaggccaaagaaatctagtgatttaggataa
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