Polynucleobacter sp. SHI8: PSHI8_14700
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Entry
PSHI8_14700 CDS
T10387
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PSHI8_14700 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poln03019
]
PSHI8_14700 (orn)
03009 Ribosome biogenesis [BR:
poln03009
]
PSHI8_14700 (orn)
Messenger RNA biogenesis [BR:
poln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSHI8_14700 (orn)
Ribosome biogenesis [BR:
poln03009
]
Eukaryotic type
Pre-60S particles
RNases
PSHI8_14700 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BDW13834
LinkDB
All DBs
Position
complement(1499732..1500292)
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AA seq
186 aa
AA seq
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MNTELKKDRLIWLDMEMSGLDPEKERILELAMVITDGNLEIIAESPVLVIRQDKTLLDGM
DAWNQGTHGKSGLIDKVLASTTTEEEAEKICLEFLATHLKSGVSPMCGNTIHQDRRFMAR
YMPKLEGFFHYRNIDVSTVKELCKRWQPEVAKNFTKKQAHTAYADIIESIEELRYYRENF
FRTPHS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacagaactgaaaaaagaccgtttaatttggttggatatggaaatgagtgggcta
gaccccgagaaagagcggattttagagttagccatggtgatcaccgatggtaatctcgaa
attattgcggaaagtcctgttttagtgattcgtcaggacaagacattactcgatggcatg
gacgcttggaatcaaggtactcatggaaaatccggcttaattgataaagtccttgcctcc
accacaaccgaagaagaagctgagaagatttgtttggagtttttagccacccatctcaaa
tcaggagtctctccgatgtgtggcaataccatccatcaagatcgacggtttatggcaaga
tatatgcctaaacttgaaggatttttccattacagaaatattgatgtctccaccgtaaaa
gaactctgtaaacgttggcagccagaagtagccaagaactttacaaaaaaacaagcccat
actgcctatgcggacatcattgagtccattgaagagttgcgctattaccgcgagaacttc
tttagaacccctcacagctga
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