Polynucleobacter sp. SHI8: PSHI8_16270
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Entry
PSHI8_16270 CDS
T10387
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSHI8_16270 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
poln01007
]
PSHI8_16270 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poln03016
]
PSHI8_16270 (trpS)
Enzymes [BR:
poln01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
PSHI8_16270 (trpS)
Amino acid related enzymes [BR:
poln01007
]
Aminoacyl-tRNA synthetase
Class I (G)
PSHI8_16270 (trpS)
Transfer RNA biogenesis [BR:
poln03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PSHI8_16270 (trpS)
Prokaryotic type
PSHI8_16270 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BDW13991
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All DBs
Position
complement(1660396..1661598)
Genome browser
AA seq
400 aa
AA seq
DB search
MYSERVLSGMRPTGSLHLGHYHGVLKNWIRLQSEYPCFFFVADWHALTTHYESPEVIQNS
VWEMVIDWLAAGVDPTQATLFIQSKVPEHAELFLLLSMGTPLGWLERVPTYKDQIEKLRE
KDLQTYGFLGYPLLQAADILIYRAQHVPVGEDQIPHVEMTREVARRFNYLYGREAGFEEK
AIEAAKKLGGKRTKLYLEARTAFQEQGDEEALEQAQAILHEAQNLSMSDRERLFGYLEGA
RKIILVEPQALLTQASKMPGLDGQKMSKSYGNTISLREDAQSISKKIKTMPTDPARVRRT
DVGDPKNCPVWELHVVYSDQTTQDWVQQGCKTAGIGCLECKEPLIQNVLKEQQPMLERAQ
KYLDDPSLLRALIADGCDKARKTAQETMRDVREAMGLDYS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtattctgaacgcgtattatctggcatgcgccccactgggtcattgcatttaggccat
tatcatggcgtattaaaaaattggattcggttgcaatctgaatacccttgttttttcttt
gttgctgattggcatgccttgacgacgcattatgaatcaccagaggtcatacaaaactcg
gtttgggaaatggtaattgattggttagccgcaggcgttgatccaacacaggcgacatta
tttattcaaagtaaagtgccggagcatgctgaattatttttactgctatccatgggaaca
cctttgggttggttagagcgggttcctacctataaagatcaaattgaaaagttacgggaa
aaagatcttcagacctatggatttttaggttatcccttgttacaggcagcggatattctc
atttatcgtgctcagcacgtaccggtgggtgaggaccaaatacctcacgtagaaatgacc
cgagaagtcgcaagacgctttaattatttgtatggtcgtgaagctggttttgaagaaaaa
gccatagaagccgccaagaaactagggggcaaaagaaccaaattatatttagaggctcga
acagctttccaagagcagggtgatgaagaagccctcgagcaagcccaagcgattttgcat
gaagcgcaaaatttatcgatgagtgatcgggagcgactgtttggttatcttgaaggggca
agaaaaatcattcttgttgaaccccaagccttattgacacaagcatccaaaatgccagga
ttagatggacaaaagatgtctaaatcttatggaaatacgatttcattgcgggaagatgcc
cagtctatttctaaaaaaataaaaaccatgccaacagaccctgcacgcgttcgaagaact
gatgttggggatcctaaaaattgcccagtttgggaattacatgtggtgtattcagatcag
actacccaagattgggttcagcaaggatgtaagacagcgggtattggctgtcttgagtgt
aaagaaccactgatacaaaatgtattgaaagagcagcaacccatgttggaaagagctcaa
aaatacttggatgacccaagcttattaagagctcttattgctgacggttgcgacaaagcg
cgcaaaactgctcaggaaactatgcgagatgttcgtgaggcaatggggcttgattactca
taa
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