Polynucleobacter sp. SHI8: PSHI8_16350
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Entry
PSHI8_16350 CDS
T10387
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln00061
Fatty acid biosynthesis
poln00071
Fatty acid degradation
poln01100
Metabolic pathways
poln01212
Fatty acid metabolism
poln02024
Quorum sensing
poln04146
Peroxisome
Module
poln_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSHI8_16350 (fadD)
00071 Fatty acid degradation
PSHI8_16350 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSHI8_16350 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSHI8_16350 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
poln01004
]
PSHI8_16350 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
poln04147
]
PSHI8_16350 (fadD)
Enzymes [BR:
poln01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSHI8_16350 (fadD)
Lipid biosynthesis proteins [BR:
poln01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSHI8_16350 (fadD)
Exosome [BR:
poln04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSHI8_16350 (fadD)
Exosomal proteins of breast cancer cells
PSHI8_16350 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Polysacc_synt_2
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BDW13999
LinkDB
All DBs
Position
1670754..1672421
Genome browser
AA seq
555 aa
AA seq
DB search
MRADKSWLNTYPKDIPHEIDLSENLTLIDVFEESFKKNASRTAFESFGKSLRFKELDEAS
EQFASFLQFQGVKKGDRVALMMPNVMQYPIAIAGTLRCGAIVVNVNPLYTPRELEHQLKD
SGAQTIVILENFVHVLSAVLSQVPMQNIVVTTMGELLGIKGMIIDFIVKYVKKLVPTWNL
PHYTTFNAALEVGKQMGFTQPVIRHDDIAFLQYTGGTTGVSKGAVLEHRNLVANILQLEA
WLKPTIQRKQIEQITFICALPLYHIFALTACGLFIIRSGGKSILIANPKDILGLIKTLSK
LSEFHIFPAVNTLFNALMNHPHFSTIDFSSLAVTIGGGMAIQKTVADRWQAHTGCPITEG
YGLSETSPVATCNLTTITEFTGHVGLPLPNTEVSIRNNLGEEVDVNQPGEICIKGPQVMR
QYWHRDDETQLVMTADGFFKSGDIGFINDAGYVKIIDRKKDMILVSGFNVYPNEVEEVLS
QIPGVLESAVIGINDEHSGSSVKAFIVKRDPTLSEKQVIDFCESNLTNYKRPKTIQFVET
LPKSNVGKILRKDLR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcagataaaagttggttaaatacctatcccaaggacatacctcatgaaatcgat
ctttctgagaatctgactctgatcgatgttttcgaggaatcgtttaaaaaaaatgcctct
cgaactgcctttgaatcttttggaaaatctctccgctttaaagagctcgatgaggcatca
gaacaatttgctagctttttacaatttcaaggggtaaagaaaggcgatcgagtggccctc
atgatgccaaatgtgatgcaatatcccattgctattgcaggtacccttcgctgtggtgct
attgtcgtcaacgttaaccctctttacactccgagagagctcgaacaccaattaaaagat
agtggcgcccaaacaatcgttattttagaaaattttgtacatgtcttaagtgcagttctt
tctcaagtcccaatgcaaaatattgttgttactaccatgggtgaattactaggtattaag
ggaatgatcatcgattttattgtgaaatacgtcaaaaaacttgtgccaacttggaatctc
cctcattacacaacttttaatgctgctttagaagttggcaaacaaatgggtttcacccaa
ccagtgattcgtcatgatgatattgcttttctgcaatacacaggtggcacaacgggggtt
tcaaaaggcgcagttctagagcatcgcaatttggttgcaaatatcttacaacttgaagcg
tggttaaagcccactattcaaagaaaacaaattgaacaaattaccttcatctgtgctctt
cccctgtatcacatcttcgctcttactgcctgtgggctttttattatcaggtcaggcggc
aaaagcatcctaattgccaacccaaaagatattctaggattaattaaaaccttatcaaag
ttgtcagaatttcatatttttccagcggttaataccttgtttaatgcgttaatgaatcac
ccccatttttcaacgattgatttttctagtctagccgttacgatcggaggtggtatggct
atccagaaaactgtcgctgatcgttggcaagcacatactggttgcccgatcacagaggga
tatggcttatccgaaacctcgccagtggcaacctgcaaccttacaacgattacggagttt
actggtcatgtaggattacctttacccaatacagaagtctctatacgtaacaacttaggt
gaggaagttgacgttaaccagcccggggaaatttgtatcaaaggcccacaagtaatgcgg
cagtattggcatcgagatgacgaaacacaattagtcatgactgccgatggcttcttcaaa
agtggtgacatcggcttcatcaacgatgcaggttatgtaaaaatcattgaccggaaaaag
gatatgattttagtgtctggatttaatgtttaccccaatgaagtcgaggaagtcttatca
caaattcctggggttcttgaaagtgccgttatcggcatcaatgatgaacactctggaagc
agtgtcaaagcatttattgttaaaagagatccgacattatctgaaaaacaggtgatcgat
ttttgtgaaagtaacctcaccaattacaaaagacctaaaacgattcaatttgtagaaact
ttaccaaaatctaatgttggtaagatcttacgtaaagatttacgctag
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