Polynucleobacter sp. SHI8: PSHI8_16780
Help
Entry
PSHI8_16780 CDS
T10387
Name
(GenBank) branched chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln02010
ABC transporters
poln02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSHI8_16780
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSHI8_16780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poln02000
]
PSHI8_16780
Transporters [BR:
poln02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
PSHI8_16780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
DUF6610
Motif
Other DBs
NCBI-ProteinID:
BDW14042
LinkDB
All DBs
Position
complement(1711943..1713157)
Genome browser
AA seq
404 aa
AA seq
DB search
MRQTKRVWLKNSLMMGLMTIAAIGINVQAQQTKAPIKIGSTLALTGPLAATGIVHKIVGE
IAIEDINSRGGLLGRKVEWILKDDQSKPDVARTLYEQLITSDKVDMLMGPYATGAILSAM
GVAQRNDKVLIHHTFGIPNQAKYDKQFPTWALGPRPEKTSPSIVFDAVATLPNPPKTIAI
VTSKFPSIYFMSVGAREVAKTKGLKEILYLEWDFGNKDFGTIAARVKDAKPDMVWIGDIG
AEGVQLLEAMKKIDYSPRIHTHIYPSPGLMAQSPEADGAIAISLFQEHPPFTANKGAAEF
VRKFHEKAQAAGLPYPLVEVQAATSYSAWQTLEAAVIATKSFDDATIAKWLKANKVDTVS
GKLRWDGENNYGDDLMRVAQLQNRKWVMVYPKNVAAPGVKIEVK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgagacaaacaaaacgcgtatggttaaagaattcgctaatgatggggcttatgaccatc
gcagcgattggaatcaatgttcaagcacaacaaacaaaagcgcctatcaaaattggtagt
accttagctttgactggccctctagccgctacaggtattgtgcataagattgttggcgaa
atcgcgattgaagatataaatagtcgtggtggtttgcttggtagaaaggtcgaatggatt
ttaaaagacgatcagtccaagcctgatgttgctagaactttgtatgagcagctcattaca
agcgataaggtcgatatgttgatggggccttatgcaactggggctattttatccgcgatg
ggcgttgcccagcgcaatgacaaagtattgattcatcatacctttggtattccgaatcaa
gcgaagtatgacaaacagttcccaacctgggctcttggacctcgcccagaaaaaacttcc
ccatcgattgtctttgatgctgttgctacactgcctaatccgcctaagaccattgcgatt
gttacctcaaagtttccatcgatttattttatgtcggttggggcgcgtgaagtcgcaaaa
actaaaggcttgaaagagattttgtatttggagtgggatttcggcaacaaagattttgga
accatagcagctcgtgtaaaagatgctaagcctgatatggtttggattggggatattggg
gctgaaggcgtacaacttttagaagcgatgaaaaagattgattactcgccacgaattcat
acccatatttacccttcaccaggattaatggctcagtctccagaggctgatggggcaatt
gcgatttctttgttccaagagcatccaccatttactgccaataagggtgctgcagagttc
gttagaaagttccatgaaaaagcacaagcagctggattgccatatccgttagttgaagtt
caagcagctacatcatatagtgcttggcagactctagaggcagctgtgatcgccacgaag
agctttgatgatgctacgattgccaagtggttaaaagccaataaagtagatactgtttca
ggcaagttgcgctgggatggtgaaaacaattacggcgatgacttaatgcgggttgctcaa
ttacaaaatcgtaaatgggtcatggtatatccaaaaaatgttgcagcccctggggtaaaa
atcgaagttaagtga
DBGET
integrated database retrieval system
