Polynucleobacter sp. SHI8: PSHI8_17320
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Entry
PSHI8_17320 CDS
T10387
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PSHI8_17320 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
poln01007
]
PSHI8_17320 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poln03016
]
PSHI8_17320 (serS)
Enzymes [BR:
poln01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PSHI8_17320 (serS)
Amino acid related enzymes [BR:
poln01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PSHI8_17320 (serS)
Transfer RNA biogenesis [BR:
poln03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PSHI8_17320 (serS)
Prokaryotic type
PSHI8_17320 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DivIC
PCRF
CHASE3
Motif
Other DBs
NCBI-ProteinID:
BDW14096
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All DBs
Position
complement(1764978..1766300)
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AA seq
440 aa
AA seq
DB search
MIDPQLLRKDVNSVAAQLAKRKFILDVTKYSELEVERKTLQAHAEELQAKRNQLAKSIGM
KKSKGEDAAVEMADSINCNELLSKASQSLDVLQKEIADFMMGIPNLPHETVPEGKDENDN
VEIKRWGDTPSFAFEIKDHVDLGALHGLDFTSATKITGSRFVVLKGAIAKLHRALAQYML
DLHTTQHGYEEINVPLIVNAQSMRGTGQLPKFEEDLFKVPRKISETVTDQEEDESVENFY
LIPTAEVPVTNLARDHIFQAQELPKQYVAHTPCFRSEAGSYGRDVRGMIRQHQFEKVELV
HFVKPQDSLEALEKLTEHAQAVLEGLEIPYRKILLCTGDMGFGSMKTYDLEAWVPSQNTY
REISSCSTMGDFQARRMQARFKDGQGKPELIHTLNGSGLAIGRCLVALIENNQQEDGSIR
IPSNLQAYMGGLTVLMPPTG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgattgatccacaattacttcgcaaagacgttaatagtgttgctgcccagttggcaaag
cggaagtttattttagatgttacgaaatatagtgagcttgaagtggaaagaaaaacactt
caagctcatgcagaggaattgcaagctaagcgtaatcagttggcaaaaagtattggcatg
aagaaatcgaagggggaagatgctgctgtagaaatggctgattccataaactgtaatgag
ttgcttagtaaagctagtcagagcctagatgtattacaaaaagaaatagctgatttcatg
atgggtatccctaatttgccgcatgagacagtacctgaaggtaaagatgagaatgataat
gtcgaaattaaacgctggggagataccccaagctttgcgtttgagattaaagaccatgtt
gatttaggggcattacatgggcttgattttacttcggcaaccaaaattaccggctctagg
tttgttgttctgaaaggagcaattgccaaacttcaccgagctcttgctcaatatatgttg
gatttacatacaacacagcatggctatgaagagatcaatgtacccttaattgtgaatgcc
caatccatgcgcggcacaggtcaactgccaaaatttgaagaagatttatttaaagttcca
agaaaaatttctgaaactgtgacagatcaagaagaagatgaatcagttgaaaatttttac
cttataccaactgctgaagtcccggtgaccaatttggctcgagaccatatttttcaggct
caggaattacccaagcaatatgtcgctcacacaccttgttttagatctgaagcaggaagc
tatggccgagacgtccgaggcatgatacgtcaacatcaatttgaaaaagtggaattggtg
cattttgtaaaaccacaagattctttagaagctcttgagaaattaaccgagcatgctcaa
gcagttttagagggtttagaaattccatatcgaaaaatactattgtgcacaggcgatatg
ggttttggaagtatgaagacctatgatttagaggcctgggttccatcgcaaaatacctat
cgcgaaattagttcttgttccactatgggggattttcaggcgcgaagaatgcaagcgaga
tttaaagacgggcaaggcaagccggagttaattcatacactcaatggttctggtttagcg
attggtcgttgcttagtggcacttattgaaaacaatcaacaagaagatggaagtattcgt
attccgtctaatttacaagcttacatgggtggccttactgtattaatgccacccacgggt
tag
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