Polynucleobacter sp. SHI8: PSHI8_19960
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Entry
PSHI8_19960 CDS
T10387
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01998
branched-chain amino acid transport system permease protein
Organism
poln Polynucleobacter sp. SHI8
Pathway
poln02010
ABC transporters
poln02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSHI8_19960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSHI8_19960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poln02000
]
PSHI8_19960
Transporters [BR:
poln02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
PSHI8_19960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
BDW14360
LinkDB
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Position
complement(2039221..2040300)
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AA seq
359 aa
AA seq
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MIQFSQDKKMAQWLFLAILLCMTPWLCLFAGGNYWVRVLDFALLYVFLALGLNIVVGFAG
LLDLGYIAFYAVGAYCAGLLASPHLLNAFVHLKEVFPLGIHTSYWLILPIAALIAGVFGI
LLGTPTLKLRGDYLAIVTLGFGEIIRIFLNNLDRPINLTNGPKGINGIDAVNMFGLYFGK
KWNIAGFTIPSVILNYYLFLILVVGVVIICARLQNSRIGRAWVAIREDEIAAKAMGLNTR
NLKLLAFAIGASFGGISGALFASFQGFISPESFSLSESIVVLAMVVLGGMGHIPGVILGS
LLLAVFPEFLRAVLVPLQTMLFGHVVVDAEIIRQFLYGCALILIIRYRPNGLWPQMRVS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatccaattctcccaagataaaaaaatggcacagtggctttttttagctattttgttg
tgcatgaccccctggttgtgtctatttgcaggtggaaactattgggtcagagttcttgat
tttgctttgttatatgtgtttttggcattaggtctaaatattgtcgttggatttgcggga
ttgcttgacctaggttacatcgctttttacgctgttggagcgtattgtgcaggattatta
gcttcccctcatctactcaatgcatttgtgcacctcaaagaggtgtttcctttgggtatt
catacttcgtattggttaattttgccgatagctgcattgatagctggagtatttggcata
ttgttaggcacgcccacacttaaacttcgaggggactatttggcgattgttactttgggt
ttcggagaaattattcgtatttttctaaataacttagatcgcccaattaatttaacaaat
ggacctaaagggattaatggtattgatgccgtaaatatgttcggtttatattttgggaag
aagtggaatattgctggatttaccatcccatcagtgatccttaattattatttattctta
attttggtcgttggggttgtgatcatttgtgcccgcctacaaaactcaaggattggtcga
gcatgggtcgcgattcgtgaagatgaaattgcagccaaagcaatgggactcaatacgcgt
aacttgaaactcttagcatttgcaattggcgcctcctttggcgggatttcaggggcatta
tttgcatcatttcagggctttatctcaccggaatcattctctttatcggagtcaatcgtt
gtcttagccatggtggttcttggcggaatggggcatatacccggagttattttaggaagc
ttattacttgcggtatttccggagttcctgagagccgtcttagtgccactacaaacgatg
ctatttgggcatgttgtggttgatgctgaaatcattcgtcaatttttatatggatgtgcg
cttatcttaatcattcggtatcgtcctaatggcttatggccacagatgagagtctcctga
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