Polynucleobacter sp. SHI8: PSHI8_22940
Help
Entry
PSHI8_22940 CDS
T10387
Name
(GenBank) transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
poln Polynucleobacter sp. SHI8
Brite
KEGG Orthology (KO) [BR:
poln00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
poln01011
]
PSHI8_22940
Enzymes [BR:
poln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSHI8_22940
Peptidoglycan biosynthesis and degradation proteins [BR:
poln01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSHI8_22940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
BDW14658
LinkDB
All DBs
Position
complement(2334171..2336111)
Genome browser
AA seq
646 aa
AA seq
DB search
MNLLRISTLIISLLFSISLCAATKNTFKSSSSNQASQSTKKVEGLSEQDKKFIELREAAR
KNDLLKASQLANQLSDYEIPDYVEYFKIKPRLYDSAAKSNAATDADSEVNNFLKKYKGSG
LADRMRNDWLLVLGKRKDWANFDIEYPQFALDDDTQVKCYAMMSKLAKGEPPKNVGAQAK
ATLLDPRYFGDACPELVSQLYARGGLSKQESQGISRSATEMNFDSLGQRMGVDDPIAGIV
KKARTNPNLAMKTFDENDWKNNTEYKGMAWGVIGQFLAKKLDPTAIDAYRKQHALGNSEL
LSPESSEWKIRAALREKDWRLVKESVETMPEAVRARDPAWTYWYGKALKELGDERANEQF
EKLANQFNFYGQLSLEELGRPIQVPPKTVITDADMKSISKSIPAFNKAAKLYDMNLRTEG
NREWNWELRGMSDKELLASAEYGKKINMLDRTVNTSDRTKQEHNFSLRYPTPYIDKLNPI
TKQIQLDVNWVYGLIRQESRFVTAARSHVGASGLMQVMPATGQFVAKKIGMSDYTPDKLS
ELQTNLVLGSNYLNMVLNDLDGSWGLASAAYNAGPGRPKQWRQTLTKPVSMEIFAETIPF
TETRTYVKNVLSNAVYYEILSTGKPQSLKAKLGTVNPSQVINSNLP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcttagaatatccacgctcatcatctctctactctttagtataagtctttgt
gccgcaacgaagaatacttttaagtcctcgagtagtaatcaggcatctcaatcgactaag
aaagttgagggcctttcagagcaagataaaaagtttatcgagttaagagaggctgccaga
aaaaatgaccttttaaaagcatctcaattggctaatcaactgtctgattatgaaattcct
gattatgtagagtatttcaagatcaaaccacgtttgtacgatagtgccgcaaaatctaat
gctgcgacagatgcagattctgaagtaaataatttccttaaaaaatataaaggaagtggt
cttgcggatcggatgcgcaatgattggttgctcgtacttggcaaaagaaaagattgggca
aattttgacattgagtatccgcaatttgctttagatgatgatactcaagtcaagtgttat
gccatgatgtctaagcttgcaaaaggcgagccacccaaaaatgtcggagctcaagcgaag
gcaactttattagaccctagatattttggtgatgcttgtccagaattggtctcgcaactc
tatgcgcgtggtggtttatcaaaacaagagtcacagggtattagccgaagtgccacagag
atgaattttgatagcttgggacaaagaatgggagtggatgatcccattgctggaattgtc
aaaaaagcgcgcacaaatcccaacttggcaatgaagacatttgacgaaaatgattggaaa
aataataccgaatataaaggtatggcgtggggcgtcattggtcaatttttagcaaaaaaa
ctagacccaacagcaattgatgcttatcgtaaacaacatgcattaggaaatagcgaatta
ctttcgccagaatcaagtgaatggaaaattcgcgcagcacttcgagaaaaagattggcgt
ttggttaaagagtcagttgagactatgcccgaggctgttcgcgctcgtgatccagcctgg
acgtactggtatggaaaagccttaaaagaattaggtgatgagcgtgccaatgagcaattt
gaaaaactagcaaaccaatttaatttttatggacagctttcattagaggagcttgggagg
cctatacaagttccaccaaaaacagttattacagatgcagatatgaagtcgattagtaaa
agtattcctgcatttaacaaagccgctaagttatatgacatgaaccttcgcactgagggt
aatcgtgagtggaattgggaattgcgcggtatgtctgacaaagaattacttgctagcgct
gaatatggcaaaaaaattaatatgctcgatcgtaccgtcaatacgtcggatagaacaaag
caagagcataatttttcattaagatatcctacgccctatattgataaattaaatcccatt
accaagcaaatccagttggatgtcaactgggtctatggcttaatccgacaagagtctaga
tttgttacggctgcgcgctcacatgttggggcgtcaggactgatgcaggttatgccagcc
acaggacagtttgtggctaaaaaaataggtatgagtgattacacgcccgataagttatcc
gaattacaaaccaatctagtacttggaagtaattatcttaatatggttttaaatgatctt
gatggctcttggggattagcttctgctgcatataatgctggaccaggaagacctaagcaa
tggcgtcaaacccttactaagcctgtcagcatggagatttttgcagaaacaatccctttt
acagaaacgagaacctacgtcaaaaatgttctttcaaatgctgtatattatgagatatta
agtactggcaagccccagtcacttaaagcgaaactcgggactgttaatccaagccaagtc
atcaatagcaacttgccataa
DBGET
integrated database retrieval system
