Polaribacter sp. Q13: JOP69_04065
Help
Entry
JOP69_04065 CDS
T10394
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
polq Polaribacter sp. Q13
Pathway
polq03420
Nucleotide excision repair
polq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
polq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JOP69_04065
03430 Mismatch repair
JOP69_04065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polq03400
]
JOP69_04065
Enzymes [BR:
polq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JOP69_04065
DNA repair and recombination proteins [BR:
polq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JOP69_04065
MMR (mismatch excision repair)
Other MMR factors
JOP69_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
ResIII
AAA_11
HsdM_N
Motif
Other DBs
NCBI-ProteinID:
QVY66472
LinkDB
All DBs
Position
complement(996419..998740)
Genome browser
AA seq
773 aa
AA seq
DB search
MSTYLDSLNEAQRQAVLQKDGPMIIIAGAGSGKTRVLTYRIAHLMQQGVDSFNILSLTFT
NKAAKEMKARIAGVVGNSESRNLWMGTFHSVFARILRTEADKLGFPTNFTIYDSQDSVRL
ISAIIKEKNLNREQYKPKQILGRISSFKNSLITVKAYFNNPDLQEADLHASRPEVGNIYR
TYVDRCFKAGAMDFDDLLLRTNELLARFPETLAKYQDRFRYIMVDEYQDTNHSQYIIVRA
LADKFGNICVVGDDSQSIYSFRGANIQNILNFQKDYPEVKTFKLEQNYRSTSNIVNAANS
VIEKNKTKLDKEVWTSNDPGDAINVMRTISDGEEGRFVAQSIWENQMNHQLTPDDFCVLY
RTNSQSRAIEDALRKKGIEYKIYGGISFYQRKEIKDILSYLRILINPNDEEALKRIINYP
ARGIGATTIDRLTIAANHYKKSIFDIIKYIDKIDLKINAGTKNKLRNFMTMMQSLQIESQ
TKNAFEIAETVVKKTLLIKDLEKDGTPEAVSKVENVQELLNGIKDFITDKIEEGGDTSLT
TFLEDVALATDFDAKKDDDKPSVSLMTIHQSKGLEYMYVYIVGLEENLFPSAMSMNTRSE
LEEERRLFYVAITRAEKVAYLSYAQTRYRWGKLVDAEPSRFLEEIDDQYLNYITPKSTNP
AINNFVDKSIFDDAPKGIRFQKPIQRKKMERDLVKKKEIVIPKNLKKVSQATSKANLFDS
NIVVGNFVEHNRFGTGEVIALEGNGPNKKAEIKFGTVGKKKLLLQFAKLKVIG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacatatttagattctttaaacgaagcacagagacaagctgtcttacagaaagat
ggacccatgattattattgcgggtgcgggttctggtaaaacacgtgtattaacctataga
attgcgcatttaatgcagcaaggcgtagattcatttaacattttatcgcttacatttacc
aacaaagcagccaaagaaatgaaggcaagaattgctggtgttgtaggtaatagtgaatct
agaaacctgtggatgggaacttttcactccgtttttgctagaattttacgaactgaagca
gataaattagggtttccaactaattttacaatttacgattctcaagattctgttcggttg
atatcagccattataaaagagaagaatttaaatagggaacaatacaaaccaaaacagatt
ttaggaagaatttcttcctttaagaacagtttaattacggtaaaagcctattttaataat
ccagatttacaagaagcagatttacacgcaagtagaccagaagttggtaatatttacaga
acttatgtagacagatgctttaaagcaggagcaatggattttgatgatttattgttaaga
accaatgagttattagcccgttttccagaaactttggcaaaatatcaagaccgttttaga
tatattatggtagatgagtaccaagataccaatcactctcaatatattattgtgagagct
ttggcagacaaatttggaaacatttgtgtggttggagacgattctcagagtatctatagt
tttaggggggcaaatattcagaatattttaaatttccagaaggattatccagaagtaaaa
acctttaaactagagcaaaattatcgttctacaagtaatattgtaaacgctgcaaattct
gtaatcgaaaaaaataaaacaaaattagataaagaagtttggacctctaatgatcctgga
gatgctataaatgtaatgcgtactatttccgatggagaagaaggtcgttttgtggcacaa
tctatttgggaaaaccaaatgaaccatcaattaactccagatgatttttgtgtattgtat
agaacaaactcacaatctagagctattgaagatgccttacgtaaaaaaggaattgagtat
aaaatctatggagggatttccttttatcaaagaaaagaaatcaaagatattttatcatat
ttacgtattttaatcaacccaaatgatgaagaagcgttaaaaagaattatcaattatcct
gctagaggaattggtgcaacaaccatagataggttaacaattgctgctaatcattataaa
aaatcaattttcgatattattaaatatattgataaaatagatttaaaaataaatgcagga
actaaaaataagctccgtaattttatgacgatgatgcaaagtttgcaaatagaatcgcaa
actaaaaatgcctttgaaattgcagaaacggtagtaaaaaagaccttattaataaaagat
ttagaaaaagacggaacgccagaagcagttagtaaagtagaaaacgttcaagagctttta
aacggaattaaagactttattaccgataaaattgaagaaggtggagatacctctttaact
acttttttagaagatgtggctttggctacagattttgatgctaaaaaagatgatgataaa
ccctctgtttctttaatgaccattcaccagtctaaaggattggaatatatgtacgtgtac
attgttggtttagaagaaaacttatttccttctgcaatgagtatgaatactagaagtgag
ttagaagaggagagaagattgttctacgtggccataacaagggcagaaaaagtggcttat
ttaagttatgcgcaaactcgttatagatgggggaaattggtagatgcagaaccaagtagg
tttttagaagaaatagatgatcagtatctaaattacattacaccaaaaagtacaaatcca
gcaattaataattttgttgataaaagtatttttgatgatgctccaaaaggaattcgtttt
caaaaaccaattcaacgtaaaaaaatggagcgtgatttggtgaagaaaaaagagattgtt
attcctaaaaacttaaaaaaagtatctcaagcaacctcaaaagcaaatttatttgacagc
aatattgtggttggtaattttgtagagcacaatagatttggaacgggagaagtaattgct
ctagaaggaaatggaccaaataaaaaggcagaaattaaatttggtacggttggtaagaag
aaattattgctacaatttgctaaattaaaagtgattggttaa
DBGET
integrated database retrieval system
