Polaribacter sp. Q13: JOP69_06820
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Entry
JOP69_06820 CDS
T10394
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
polq Polaribacter sp. Q13
Pathway
polq03018
RNA degradation
Brite
Enzymes [BR:
polq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JOP69_06820
Messenger RNA biogenesis [BR:
polq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JOP69_06820
Ribosome biogenesis [BR:
polq03009
]
Prokaryotic type
rRNA helicases
JOP69_06820
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QVY66990
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Position
1637306..1639108
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AA seq
600 aa
AA seq
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MSTFLELGLKEPINRALTDLGYEKPTVIQEKAIPQIISSTDDLKAFAQTGTGKTAAFSLP
ILELLDTNSKNVQAIILSPTRELAVQIGNNIKDFCKYLPDVKVATVYGGSSMEDQIRSLK
RGAQIVVGTPGRTVDLINRRALKLGNVQWLVLDEADEMLNMGFKDELDKVLEATPETKQT
LLFSATFPREVESIARNYMTKPVEITSGEKNSGSENVSHEYYSVTERTRYPALKRIADLN
PDIYAIIFCRTRRETQEVADNLIKDGYSADALHGDLSQGQRDSVMGKFRKKTIQILVATD
VAARGLDVTELTHVINHKLPDQIENYTHRSGRTGRAGNKGISIVLVNGKEKGKLRQIERI
IKKKFEEGKVPSGKEIVQNQLMNLIDKVQNTEVNESEMEEFLPSIYEKLESLDREELIKK
FVSLEFNTMLKYYENSKDLNDLSSRENSRARTVNENMTRFFINIGRKDNLNPGKLIGLIN
DQNIGDKIEIGSIDILDTFSFFELDKNFEDQTLEAFASNQPDFDGRSVNIEITKKERSGG
GRRGGKKPFGKKDGGFGRRRSSDSPSSRGKSDRSSSDRADRNTGGGDRKSGGFGRRRRER
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttttagaattaggtttaaaagaaccgattaacagagcattgacggattta
ggttacgaaaaacctaccgtaattcaggaaaaagcaattccacaaattatttcatctaca
gacgatttaaaagcatttgcacaaacaggtacaggtaaaactgctgcttttagtttgcca
atattagagcttttagataccaatagtaaaaacgtacaagcaattattttatcaccaaca
agagaacttgcagttcaaattggtaataatattaaggacttttgtaaatatttaccagat
gtaaaagtagctaccgtatatggtggttctagtatggaagatcaaattagatctttaaaa
agaggtgcacaaatagtagttggaactccaggtagaactgtagatttaattaacagaaga
gctttaaaattaggaaacgttcaatggttagtcttagacgaagcagatgaaatgttaaac
atgggttttaaagacgaattagataaagtcttagaagctactccagagacaaaacaaact
ttattgttttctgcaacttttcctagagaagttgagtctattgcaagaaactacatgacc
aaaccagtagaaatcacttctggtgagaaaaattctggttcagaaaatgtaagtcatgaa
tattattcagttacagaaagaactcgttaccctgcattaaaaagaatagcagatttaaac
cctgatatttatgcaattatcttttgtagaactcgcagagaaacacaagaggttgcagac
aacctaataaaagatggctatagtgcagatgctttgcatggagatttatctcaagggcaa
agagattctgtaatgggtaaattccgtaagaaaacaattcaaatattagtagctacagat
gttgctgctcgtggattggatgtaacggaattaacgcacgtaataaaccataaattacca
gaccaaatagaaaactatactcatagaagtggtagaactggtagagctggtaataaaggt
atttctattgttttagtaaatggaaaagaaaaggggaaattacgtcagattgaaagaata
attaaaaagaaatttgaagaaggtaaagttccttctggaaaagaaattgttcagaatcaa
ttaatgaatttaattgataaggttcaaaatacggaagtaaatgaatctgaaatggaggaa
tttttaccaagtatttatgaaaaactagaatcattagatagagaagaattaatcaaaaaa
tttgtttctttagaatttaatacaatgttaaagtattacgaaaactctaaagacttaaat
gatttatcttctagagaaaattctagagcgagaacggttaatgaaaacatgacccgtttc
tttatcaacattggtagaaaagacaacttaaacccaggtaaattaataggtttaattaac
gaccaaaatattggtgataaaatagaaataggttctatagatatcttagatactttttct
ttctttgaacttgataaaaatttcgaagaccaaacattagaagcttttgctagcaatcaa
ccagattttgatggacgctctgtaaatatagagattactaaaaaagaacgttctggtggt
ggacgaagaggtggtaaaaaacctttcggtaaaaaagatggaggttttggaagacgtaga
agttctgacagcccttcttctagaggaaaatcagatagaagctcttctgatagagcagat
agaaatacaggtggtggagacagaaaatctggcggattcggaagaagacgtagagaacgt
taa
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