Polaribacter sp. Q13: JOP69_10425
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Entry
JOP69_10425 CDS
T10394
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
polq Polaribacter sp. Q13
Pathway
polq03030
DNA replication
polq03410
Base excision repair
polq03420
Nucleotide excision repair
polq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
polq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JOP69_10425 (polA)
03410 Base excision repair
JOP69_10425 (polA)
03420 Nucleotide excision repair
JOP69_10425 (polA)
03440 Homologous recombination
JOP69_10425 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polq03032
]
JOP69_10425 (polA)
03400 DNA repair and recombination proteins [BR:
polq03400
]
JOP69_10425 (polA)
Enzymes [BR:
polq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JOP69_10425 (polA)
DNA replication proteins [BR:
polq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JOP69_10425 (polA)
DNA repair and recombination proteins [BR:
polq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JOP69_10425 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JOP69_10425 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
RNase_H_2
HHH
HHH_5
Polycystin_dom
DUF6853
Motif
Other DBs
NCBI-ProteinID:
QVY64190
LinkDB
All DBs
Position
2503833..2506685
Genome browser
AA seq
950 aa
AA seq
DB search
MSDQKRVFLVDAFALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSIDRVEMFEAYKANRDETPEAIKLAVPYIQEILKAMHIPIMVKEGFEADDVIGT
LSKQAEKEGYKTYMVTPDKDFAQLVSENIFMYKPRFGGGYDIWGVDEVKEKFGVENPEQV
IDFLGMMGDSADNIPGLPGVGEKTAKKFLAAYGSMENLLANTHELKGKMKEKIEANGELG
LLSKQLATIMLDVPVTFDAKDFELDQPDKEKVTELFNELEFRNLLTNFLRTFAVENAEKA
NSVEDNKNTDSSPLQSKKATPAPEGQFDLFAAPGSGSVSEAEVASGFKSIKDTNHFYQHI
DSPFARKLLLKKLMEQTSVCFDTETTGLKALEVELIGIAFSYEVGKGYYVSFPEDQEETK
AILEEFRPFFTSDEIEKIGHNLKYDIKVLSNYEMPVKGKLFDTMIAHYLINPDMRHNMDM
LAETYLNYQPVSIVDLIGKKGKNQLSMRVVPLADQTEYAVEDADITFQLKQLFTSELESG
NVTNLFNDIETPLVSVLTAMEIEGININIDFLKELSVALTEDINRLEKNIYEQAGEEFNI
ASPKQLGIVLFEKMELVKKPKKTKTGQYKTGEDILSFLAKDHKIIRDIQEYRQYKKLQST
YVDALPNEVNPKTGRIHTEYMQAVAATGRLSSNNPNLQNIPIRTERGKEVRKSFIPRDEN
HVLLAADYSQIELRIIAALSEEENMIEAFKNGEDIHASTAAKVFNVPLDEVTREQRSNAK
TVNFGIVYGVSAFGLSNQTDLSRSEAKELIDTYYETYPKLKAYMAAQVDFAREHGYVETV
LNRRRYLKDINSRNAMVRSGAERNAVNAPIQGSAADIIKLAMINIHNRFEKEGFKSKMLL
QVHDELVFDAHKDELEIIRPIIKDEMENAFKMSVPLDVEVGIGENWLQAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcagaaaagagtttttttagtggatgcttttgcattaatttttagaggatat
tatgcatttataaaaaaccctagaattaatagtaaaggtttagatacgtctgcaataatg
ggttttatgaactcgcttttagatgttattaaacgtgaaagaccagatcatttagcggtt
tgttttgataaaggcggtagtatagacagagtagaaatgtttgaagcttataaagccaac
cgagacgaaactccggaagctattaagttagcggtaccttacatacaagaaatcttaaaa
gccatgcacattcctattatggtaaaagaaggttttgaggcagatgatgttattggaacc
ctttctaaacaagcagaaaaagaaggttacaaaacgtatatggtaacgccagataaggat
tttgcgcaactagtttctgaaaatattttcatgtacaaaccccgttttggtggtggttac
gatatttggggagtggatgaagtaaaagaaaagtttggtgtagaaaacccagagcaagtc
attgattttttaggaatgatgggagattctgcggataatattccaggtttacctggagtt
ggagaaaaaacagctaaaaagtttttagcggcttatggttctatggaaaatctattagca
aatacgcatgagctaaaaggaaaaatgaaggagaagatagaagcaaacggagaattaggg
ttactttctaaacaattggcaacaattatgttagatgttccggtaacttttgatgcgaaa
gattttgaattagaccaaccagacaaagaaaaagtaacggaactttttaacgagttagaa
tttagaaatttattaaccaacttcttacgaactttcgcagttgaaaatgcagaaaaagca
aattctgtagaggataacaaaaacacggactcaagtccgttgcaaagcaaaaaagctact
ccggctcctgaaggtcagtttgatttatttgcagcaccgggaagcggaagcgtttctgaa
gcagaagttgcatctggttttaaatcgataaaagatacgaatcatttttatcaacatata
gactctccttttgctagaaaattattattgaagaaattaatggaacaaacttcggtttgt
tttgatacagaaaccacgggcttaaaagccttggaagttgaattaataggtattgctttt
tcttacgaagttggtaaaggatattatgtctctttcccagaagatcaagaggaaaccaaa
gcaattttagaagaatttagaccctttttcacatccgatgaaatcgaaaaaattgggcat
aatttaaagtatgatattaaagttttatcaaattatgaaatgcctgtaaaagggaagttg
tttgataccatgattgcgcattatttgatcaatccagatatgcgtcataatatggatatg
ttggcagaaacgtatttaaactatcaaccagtttctattgtagatttgattggcaagaaa
ggaaagaatcagctttctatgcgtgttgttcctttagcagatcaaacagaatacgcggta
gaagatgcagatattacgtttcaattaaaacaactttttacgagtgagttagaaagtgga
aatgtaaccaacctatttaatgatatagaaactcctttagtttcggttttaaccgccatg
gaaattgaaggaattaatattaatatcgatttcttaaaggaattatctgttgctttaacc
gaggacattaacagacttgaaaaaaatatttacgagcaagcaggagaggaatttaatatc
gcttcgccaaaacaattaggaattgtgttgttcgaaaaaatggagttggttaaaaaacct
aaaaagactaaaacgggtcagtataaaaccggagaagatattttatctttcttagcaaaa
gaccataaaattattagagatattcaagaatatcgtcagtataaaaaattacaaagcacg
tatgtagacgccttaccaaatgaagtgaatccgaaaacaggtagaattcatacagaatac
atgcaagctgttgctgctacgggaagattgagttctaacaacccgaatttacaaaacatt
cctattagaaccgaaagaggtaaagaagttagaaaatcgtttattccaagagatgaaaac
catgtgttattagctgcagattatagtcaaattgaattaagaattattgctgctttaagt
gaagaagaaaacatgatagaagcttttaaaaacggcgaagatattcatgcttctacggct
gcaaaagtgtttaatgttcctttagatgaagtaactcgcgaacaacgtagcaatgcaaaa
acagtaaacttcggaattgtatatggagtttcagcatttggattgagcaatcaaaccgat
ttatctagaagtgaagcaaaagaactaattgatacctattatgaaacgtacccaaagtta
aaagcctacatggctgcacaagtagattttgcaagagaacacgggtatgtagaaacggtt
ttaaacagacgtaggtatttaaaagatatcaattctagaaatgcaatggttagatctggc
gcagaaagaaatgccgtaaatgcaccaatacaaggttctgcagcagacattataaaactt
gccatgattaatattcataaccgttttgaaaaagaaggttttaaatctaaaatgttattg
caagtacatgatgaattggtttttgacgcacataaagacgagttagaaattattagacct
attataaaagacgaaatggaaaatgcttttaaaatgagcgttcctttagatgttgaagtt
ggaattggtgaaaactggttacaagcacattaa
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