Polaribacter sp. Q13: JOP69_16340
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Entry
JOP69_16340 CDS
T10394
Symbol
gatB_aspS
Name
(GenBank) bifunctional amidotransferase subunit GatB/aspartate--tRNA ligase AspS
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
polq Polaribacter sp. Q13
Pathway
polq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
polq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JOP69_16340 (gatB_aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
polq01007
]
JOP69_16340 (gatB_aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
polq03016
]
JOP69_16340 (gatB_aspS)
03029 Mitochondrial biogenesis [BR:
polq03029
]
JOP69_16340 (gatB_aspS)
Enzymes [BR:
polq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JOP69_16340 (gatB_aspS)
Amino acid related enzymes [BR:
polq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JOP69_16340 (gatB_aspS)
Transfer RNA biogenesis [BR:
polq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JOP69_16340 (gatB_aspS)
Prokaryotic type
Other AARSs
JOP69_16340 (gatB_aspS)
Mitochondrial biogenesis [BR:
polq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JOP69_16340 (gatB_aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GatB_N
GAD
tRNA_anti-codon
GatB_Yqey
tRNA-synt_2d
tRNA-synt_2b
ParM_N
DUF8128
Motif
Other DBs
NCBI-ProteinID:
QVY65294
LinkDB
All DBs
Position
3874075..3877410
Genome browser
AA seq
1111 aa
AA seq
DB search
MELEQLNELIKKHDLELVIGIETHVRLNTKSKLFCSCANQEIEQPNQNICSVCTGQMGVL
PSINKEAITKAIYFGKAVKSTFSNEVISWDRKHYEYPDNPKNIQITQFHNPVIPDGQVSC
YRNDGSQFTVSLTQVHIEEDAAKLMHEKKISLVDFNKAGVPLIEIVTDPCIRNIEDASTY
AQYIQRIVQNLKISEANLEKGEFKSDVSVSLRKKRTYDLNPRTEIKNLNSFKFMVDALKE
EVEKQLNYYVENKAFRPDQTTVLWDADLKQTKTMRKKEFEADYRFISEPDLPFVNIKKVV
ESIDVDISSLPFAVESILINGGVLPQDAKFFTADSLRSAVFVAINNKINDASFVAKTLVN
NIGADEYENIHDVAQLTEIFQLFKDDKITSVLVQNGITSYLKDRNFDYNKYFEDNTISED
KIKDAVKKVIAENEAIANDIKAGNQGKAGILVGKVIGIIGKGASGKVIREEILDALSNSP
LAVSEEPIANSQQQQIANSEKPKTEEELPKVPIIIKENYRTHKISQLSEETINEEVTLSG
WVSSVRDHGELIFIDLRDSSNQVFQVRLSRETFPNLDELVKLKSESVISVTGVVVQRNED
DYNAGLRTGKIELETSVLEILNLSKTLPFEIKRAMKTNETTRFQYKFLDHRNDEVRKAIV
NRHKVIKLLRDILDEEEFLEIETPILTAGTDEGAREFIVPTRKQAGSFYTLPQAPQQFKQ
MLMVGGFEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQIIDLNTKMFNEVVNKI
YGKKWILRPFEVITYKDAMDKYGCDRPDLRYGLQMQDITDIVKDTTFQVFSKPIEDGGIV
KCIKVSAAEQGNKRMSKGQIENLTAIAQQNGLGGLAYIIVNENDLQSPIIKFLGEEIAAY
IIKATDAQVGDIVFFSAADYATANKALDAVRQEMGRILKLINPKELRPAWVVDFPMFEKT
DEGRWTFTHNPFSMPAIYDLEKHMTGEGEEIGTIIAQQYDLILNGYEIGGGSVRAHKAEI
LEATYKNMGYDKEGMMKSVGTMYKAFQYGAPPHGGIAWGVDRLMMILEKKASIREVMAFP
KTGSSEDLLFNAPSILSDKKVEEMNVKIMRK
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggaactggaacaattaaatgagcttattaaaaagcacgacttagagttagtaatcggt
attgaaacacacgttcgattaaatacaaaatcaaagttattctgttcttgtgcaaatcaa
gaaatagagcaaccaaatcagaatatatgttcggtttgtactgggcaaatgggtgtttta
ccatcgataaataaagaagcaattaccaaagctatttattttggaaaagcggtaaaatct
actttttctaatgaagttatttcttgggatcgtaaacattatgaatatccagataaccca
aagaacattcaaattacacagtttcacaatcctgtaattccagacggacaagtttcttgt
tatagaaatgatggttcgcaatttacggtgagtttaacgcaagttcatattgaggaagat
gctgcaaaattgatgcacgaaaagaaaatttctttagtcgattttaacaaagcaggtgtt
ccgttaatcgagattgttaccgatccttgtattcgtaatattgaagatgcttctacgtat
gcgcaatacattcaaagaattgttcagaatttaaaaatctctgaagcaaatcttgaaaaa
ggtgagtttaaatcggatgtttctgtatcacttagaaaaaagcgtacgtatgatttaaac
ccaagaacagaaatcaaaaacttaaattcttttaagtttatggtagatgcgttaaaggaa
gaagttgaaaagcaattaaattattacgtagaaaataaagcgtttagaccagaccaaact
acggttttatgggatgccgatttaaagcaaaccaaaacgatgcgtaaaaaggaatttgaa
gcagattatcgttttatttctgagccagatttaccttttgtcaacattaaaaaagtagta
gaaagtattgatgtagatatcagttctttgccttttgccgtagaatctattttgataaat
ggtggcgttttaccacaagacgcaaagttttttacagcagattctttacgttctgcagta
tttgtagctatcaataataaaattaacgatgcttcttttgtagccaaaacattggtgaat
aatattggtgcagatgagtatgaaaatattcatgatgtagctcaattaacagagattttc
caattatttaaagacgataaaattacctctgttttagtacaaaacggaattacatcgtat
ttaaaagataggaacttcgattacaacaagtattttgaagacaatactatttctgaagat
aaaattaaagatgccgttaaaaaggtgattgcagaaaatgaagcaattgcaaacgatatt
aaagcaggaaatcaagggaaagctggtattcttgttggtaaagtaatcggtattataggt
aaaggagcttcagggaaagttatccgtgaggagatattagatgcacttagcaattcgcct
ttagcggttagcgaagagccaatagctaatagccaacaacagcaaatagccaatagcgaa
aagccaaaaacggaagaagaattacctaaagttcctataataatcaaggaaaactacaga
acgcataaaatttctcagttatcagaagaaacaattaatgaagaagttacattgtctggt
tgggtttctagtgtgcgtgatcacggagaattaatttttatcgatttaagagattctagc
aatcaagtttttcaagtacgtttaagtagagaaacttttcctaatttagatgaacttgta
aagttgaaatcagaatctgttatttctgtaaccggagtagtggttcagagaaacgaagat
gattataacgcaggtttaagaaccggaaaaatagaattagaaacatctgtattagaaatt
ttaaacttatctaaaaccttgccttttgaaataaaaagagcaatgaaaacgaatgaaact
actcgttttcaatacaagtttttagatcatagaaatgatgaggttcgtaaagcaattgta
aatagacataaagtaattaagttacttcgtgatattttagatgaagaagagtttttagaa
attgaaactccaattttaactgcaggtacagatgaaggagcaagagaatttattgttcct
acaagaaaacaagcaggttctttttatacattaccacaagcaccacaacaatttaagcaa
atgttaatggttggtggatttgaaaaatattttcaaatagcacgctgttttagagatgaa
gattctcgtggagacagacagccagaatttacacaattagatattgaaatggcatacgca
agtatgcagcaaatcatcgatttaaacactaaaatgtttaatgaagttgtgaataaaatt
tatggtaaaaaatggattttacgtccgtttgaagtaattacgtataaagatgcaatggat
aaatatggttgtgatagaccggatttacgttatggtttgcaaatgcaagacattacagat
attgtaaaagataccactttccaggtttttagcaaaccaattgaagatggtggaattgta
aaatgtattaaagtttctgcagcagagcaaggaaacaaacgtatgtctaaaggacaaata
gaaaacttaactgccattgcacaacaaaatggtttaggtggtttggcttatattattgtg
aatgaaaacgatttgcaatcgccaattattaagtttttaggcgaagaaattgcagcctat
attataaaggctacagatgcacaagttggtgatattgtatttttctcagcagcagattat
gcaaccgctaacaaggcgttagatgcggtacgtcaagaaatgggacgtattttaaagttg
atcaatccgaaagaactaagaccagcttgggttgtagattttccaatgtttgaaaaaact
gatgaaggaagatggacgtttacgcacaatcctttttctatgccagctatctacgattta
gaaaagcacatgactggagaaggcgaggagataggtacaattatcgcgcaacaatacgat
ttaatcttaaatggttatgagattggtggaggttctgttcgtgctcacaaagcagaaatt
ttagaagcaacctataaaaatatgggttacgataaagaaggaatgatgaaaagtgttgga
accatgtacaaagctttccaatacggagcgccacctcacggaggaattgcttggggagta
gatcgtttaatgatgattttagaaaagaaagcgtctattagagaagtaatggctttccct
aaaacaggttcttctgaagatttattatttaatgcgccttctattttgagtgataagaaa
gtggaagagatgaatgtaaagattatgaggaagtag
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