Polynucleobacter sp. TUM22923: TUM22923_00740
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Entry
TUM22923_00740 CDS
T10645
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TUM22923_00740 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
polt03021
]
TUM22923_00740 (rpoA)
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_00740 (rpoA)
Enzymes [BR:
polt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TUM22923_00740 (rpoA)
Transcription machinery [BR:
polt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TUM22923_00740 (rpoA)
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TUM22923_00740 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF6165
Motif
Other DBs
NCBI-ProteinID:
BDX20753
LinkDB
All DBs
Position
69237..70217
Genome browser
AA seq
326 aa
AA seq
DB search
MQTNLLKPKIISVEALTANQAKVVMEPFERGYGHTLGNALRRVLLSSMGGYAPTEVAIAG
VVHEYSTLDGVQEDVVNLLLNLKGIVFKLQSRDEVTINLRKEGPGVVTAKDIDLPHDVEI
INPEHVIAHLSAGGKLDMQIKVEKGRGYVPGNMRQYQDEATKIIGRIVLDASFSPVSRVS
YAVESARVEQRTDLDRLVMTIETNGVLTPEEAIRQAATILVDQLVVFAALESSEISGDLA
PSRSSMVDPMLMRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKDVLAARGLSLGMKLESWPPANLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaatttgctcaagccaaagattatttctgttgaagcgcttaccgccaaccaa
gctaaggttgtgatggagcctttcgagcgtggctatggtcatacactcggaaatgctttg
cgtcgtgttttattgtcttctatgggtggttatgcaccaactgaagtagctattgccggt
gttgttcatgagtactctacattagatggcgtacaagaagatgtagtgaacttactgttg
aacctcaagggtattgtatttaaattacagtcacgcgatgaagtgactattaatttgcgc
aaagaaggcccaggcgttgttacagcaaaagatattgatttgccacacgatgtagaaatc
atcaatcctgaacacgttattgctcacttatctgctggtggtaagttagacatgcaaatc
aaggttgaaaaaggtcgtggctatgttcctggaaatatgcgtcaatatcaggatgaagcc
actaagatcataggtcgaattgtgttggatgcctcttttagtccagtaagtcgcgttagc
tacgctgttgagtctgctcgtgttgaacaacgtaccgaccttgatcgtctagtaatgact
attgagaccaatggtgtgttgactcctgaagaagcaattcgtcaagcagctactatcttg
gttgatcagttggtagtctttgcagcgcttgaaagcagtgaaatttctggtgatcttgca
ccaagtcgctcttcaatggttgatccaatgttgatgcgtcctgtagatgatcttgagctt
acagtgcgttctgctaactgcctgaaggctgaaaatatttactatattggcgatctcatt
caacgtactgaaaatgagttattgaaaacgcctaatttaggtcgtaagtcattgaatgaa
attaaagatgtattggcggctcgtggcttaagtcttggcatgaaactcgaaagctggcct
ccagctaacctcgagaaataa
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