Polynucleobacter sp. TUM22923: TUM22923_01330
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Entry
TUM22923_01330 CDS
T10645
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TUM22923_01330 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_01330 (ung)
Enzymes [BR:
polt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TUM22923_01330 (ung)
DNA repair and recombination proteins [BR:
polt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TUM22923_01330 (ung)
Prokaryotic type
TUM22923_01330 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
eIF3m_C_helix
Motif
Other DBs
NCBI-ProteinID:
BDX20812
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All DBs
Position
complement(126451..127227)
Genome browser
AA seq
258 aa
AA seq
DB search
MTAFSPADIPEDWRSLLGDYFESTQWQTLQSKLQAEIDLEGSLIRPEPQNFFKALSLTAL
SNVKVVILGQDPYHSPGLAQGLAFSVPGHIPLNSRQFPSSLRNIRKALALEGFGALSSGD
LHDWAKQGVLLLNTALSVKLGEAGSHANLGWKSLIDRLIAELVKYQPNLVWMLWGGHAQS
KLALIESGSQQLILQSSHPSGLGVYKTDQPFLQPDGKASCGHFKKANTWLTEHGLSPICW
VNQSGEDLCASDQGSLFS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgacggcattttctcctgcagatattcctgaagattggcgcagtctattaggtgattat
tttgaatctacccaatggcaaactctacaaagtaagcttcaagcagaaattgatctggaa
ggcagcctgattaggccagagccccagaatttcttcaaagccttatcgctgaccgccctt
tctaatgtcaaggtggtgattctgggtcaagatccctatcactcgccaggccttgctcaa
ggtttggccttttctgttcccggccacattcccctcaactctcgccaattcccaagctca
cttcgcaatattcgtaaagcattagccttagagggctttggcgctctttctagtggagat
ttgcatgactgggcaaagcaaggcgtactcctgctcaataccgcgctgagcgtcaaatta
ggcgaagcaggaagccatgcaaacttgggttggaaatcgctcattgatcgactgattgct
gagttggtcaagtaccaaccaaatcttgtctggatgctgtggggcggacacgcccagtcc
aagctagcccttattgaatcgggatctcagcagcttattctgcaatcctcccacccctca
ggactgggggtgtataaaaccgatcagccattcttacagcctgatggaaaagccagttgt
gggcattttaaaaaagccaatacatggttaacagaacatggtctgagcccaatatgctgg
gttaaccaatctggcgaggatctctgtgcgtcggatcaaggctcgctgtttagttga
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