Polynucleobacter sp. TUM22923: TUM22923_01970
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Entry
TUM22923_01970 CDS
T10645
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt02024
Quorum sensing
polt03060
Protein export
polt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
TUM22923_01970 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TUM22923_01970 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUM22923_01970 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
polt02044
]
TUM22923_01970 (ffh)
Enzymes [BR:
polt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
TUM22923_01970 (ffh)
Secretion system [BR:
polt02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
TUM22923_01970 (ffh)
Eukaryotic Sec-SRP protein
TUM22923_01970 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
YqeC
AAA_14
AAA_16
AAA_31
T2SSE
APS_kinase
AAA_30
AAA_33
KTI12
ATP_bind_1
Thymidylate_kin
Helicase_RecD
TsaE
6PF2K
Rad17
AAA_19
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BDX20876
LinkDB
All DBs
Position
complement(190098..191480)
Genome browser
AA seq
460 aa
AA seq
DB search
MLENLTDRLSRVVKTMRGEARLTESNTSEMLREIRLALLEADVALPVVKSLLEQIKFKAL
GEEVVGSLSPGQALVGVVQRELAQVMRGDGAQAGELNLATQPPAVILMAGLQGAGKTTSV
GKLAKYLQEKKKKKVLTVSCDVYRPAAIEQLEMVTKQVGAEFFPSNINQTPNAIALAALD
WARRHYFDVLLVDTAGRLGIDEALMQEINTLHTSLNPIETLFVVDAMLGQDAVNTAKAFH
EALPLTGVILTKLDGDARGGAALSVRQITGVPLKFIGVAEKMDGLEAFDADRMANRILGM
GDILALVEQAQQNVDVAKAEKLAGKIAKGGFDLGDFRDQLSQMQKMGGMASLMDKLPSHM
AQAASKTNLSVADKQTQRMRGIIDSMTPRERMKPELLKASRKRRIAAGAGVQVQEVNRLL
AQFDQMQTMMKQFKGGKMARTMASMAAKGAAKGLGGLFKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctagagaacctcactgatcgcctatctcgtgttgtaaaaacaatgcgtggagaggct
cgcctcaccgaaagtaacacgtcagaaatgttacgggagatccgccttgccttactggag
gctgacgtagcgcttcctgtcgtgaaatctttactcgaacaaatcaaatttaaagcccta
ggtgaagaggttgttggcagccttagtccaggccaagctttagtgggagtagtccagcgc
gaacttgcccaagtcatgcgtggcgatggcgcacaagctggggagctcaatttagcgacc
caaccaccggcagtcatactgatggcgggcctccaaggtgcgggtaaaacgacttcagtc
ggcaagctagctaagtacctacaagagaagaagaaaaagaaggttttaacagtctcctgt
gacgtctaccgcccagcagcgattgagcagttagagatggtcaccaaacaagtaggtgct
gagttttttccgagcaatatcaatcaaacgccaaatgcaatagcacttgccgccttagat
tgggcgcgacgtcattattttgatgttttattagtcgatacggctggacgcctgggtatc
gatgaagcattaatgcaagaaatcaatactctgcataccagcctaaatcctattgagacc
ctatttgtagttgatgccatgttggggcaggatgctgtcaacacagccaaagcatttcat
gaagctcttccactcactggcgtgatcttaaccaagctagatggtgatgctcgtggaggc
gccgcattatcagtacgtcaaatcactggggtgccacttaaatttattggtgtcgccgaa
aaaatggatggccttgaggcatttgatgctgatcgtatggctaaccgtattttgggcatg
ggtgacattctggcgcttgttgaacaagctcaacaaaacgttgatgttgccaaagcagaa
aagttagccggcaaaattgccaagggcggatttgatttaggtgacttcagagatcaacta
tctcaaatgcaaaaaatgggcggcatggccagcttgatggataaattgccaagtcatatg
gcacaagcagcctctaaaactaatctgagtgttgccgataagcaaacacagcggatgcgc
ggcatcatcgatagcatgaccccacgcgaacgcatgaagcccgaattactgaaagccagc
cgtaaacgccgcattgctgccggtgccggtgttcaagtacaagaagtcaaccgcctacta
gcgcagtttgatcaaatgcaaacgatgatgaaacagtttaaaggtggcaagatggcacgc
acgatggcgtcgatggctgcaaaaggagccgccaaaggacttggcggcttgtttaagaag
taa
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