KEGG   Polynucleobacter sp. TUM22923: TUM22923_02750
Entry
TUM22923_02750    CDS       T10645                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
polt  Polynucleobacter sp. TUM22923
Pathway
polt00740  Riboflavin metabolism
polt01100  Metabolic pathways
polt01110  Biosynthesis of secondary metabolites
polt01240  Biosynthesis of cofactors
polt02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:polt00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    TUM22923_02750 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TUM22923_02750 (ribD)
Enzymes [BR:polt01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     TUM22923_02750 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     TUM22923_02750 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: BDX20954
LinkDB
Position
271519..272658
AA seq 379 aa
MYTVVDHQFMSQALAQAQKALYLSTPNPRVGCVITKDGQVIGSGYTQKAGGNHAEIEALA
DAKANGFDVSGSTIYVTLEPCSHEGRTPPCSDALIAAKPAVVIAAMLDPNPLVNGRGLER
LKAAGIDVRCGLMESEARALNPGFISRMTRGLPWVRMKIAASLDGKTALTNGTSQWITGP
EARSDGHHWRAQACAILTGAGTVKEDDPTLNVRDVVTERQPWKIIIDSRLETPLDAKLFT
NLHQSGVIVVCADMDSEASQAKLKALQDLGVEVIAMANAHGKVDLAQLLRYLAKERSMNE
IHIESGHKLNGSLLRENCVDELLLYYAPCLLGDGIGMANIGTLTELKQRHDWQIMDHTVL
GQDLRVRLVQSKPKPKPKL
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgtataccgtcgttgaccatcaattcatgagccaggccttggcccaggctcaaaaagcc
ctctacttatccaccccaaacccgcgcgtaggttgcgttattactaaagacgggcaagtg
attgggagtggatatacccaaaaagccggcggaaatcatgctgagatagaggctttagcc
gatgctaaagccaatggctttgatgtctctggatcaacgatctacgtcaccttagagccc
tgtagtcatgaaggtagaacgccgccttgttctgatgcactgatcgcggctaagccagcg
gtagtgatcgctgcgatgctcgatcctaaccctctagtgaatggccgaggccttgagcgc
ttaaaagcagctggtattgacgtgcgctgtggtttgatggaatcagaagcaagggctttg
aacccaggatttatttctaggatgacacgcggtctgccttgggtgcgaatgaaaatcgct
gcaagcctagatggcaagaccgccttaacgaatggcaccagtcagtggatcacaggacct
gaggcacgctcagatggccatcactggcgtgcacaagcctgcgctattttgacgggtgcg
ggaacggtgaaagaagacgatcccacactaaatgttcgtgatgtagtgactgaacggcag
ccctggaaaatcattattgattctcggctagagacaccactagacgctaagctatttaca
aatctccatcaatctggcgtcatcgtcgtttgtgctgacatggattctgaagcgagccaa
gcaaaattaaaggcactgcaggacttaggagtggaagtgattgcaatggccaatgcccat
ggcaaggtagatctcgcacaacttctgcgctacttagcaaaagagcgttctatgaatgaa
atacacatcgagtcaggccataagctaaacggctcattactccgagaaaattgtgtcgac
gagctcttgctctactacgccccttgcttgttaggggatggcatcggcatggcgaatatc
ggtacattgactgagctcaagcaacggcacgattggcaaatcatggatcacactgtatta
ggtcaggacttacgggttcgcttggtgcagtcaaagccaaagccaaagccaaagctctag

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