Polynucleobacter sp. TUM22923: TUM22923_02840
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Entry
TUM22923_02840 CDS
T10645
Symbol
glyA1
Name
(GenBank) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt00260
Glycine, serine and threonine metabolism
polt00460
Cyanoamino acid metabolism
polt00630
Glyoxylate and dicarboxylate metabolism
polt00670
One carbon pool by folate
polt00680
Methane metabolism
polt01100
Metabolic pathways
polt01110
Biosynthesis of secondary metabolites
polt01120
Microbial metabolism in diverse environments
polt01200
Carbon metabolism
polt01230
Biosynthesis of amino acids
polt01240
Biosynthesis of cofactors
polt04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TUM22923_02840 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
TUM22923_02840 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
TUM22923_02840 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
TUM22923_02840 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
TUM22923_02840 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
TUM22923_02840 (glyA1)
Enzymes [BR:
polt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
TUM22923_02840 (glyA1)
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BDX20963
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Position
278901..280145
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AA seq
414 aa
AA seq
DB search
MFDRQNTLAKTDPELWASIQNENQRQEDHIELIASENYTSPAVMQAQGSQLTNKYAEGYP
GKRYYGGCEFVDVAEQLAIDRVKLLYGAEAANVQPHCGASANQAVFLAFLKPGDTFMGMS
LAEGGHLTHGMALNMSGKWFNPIAYGLDKNEEIDYEQMERLAREHKPKLIISGASAYSRK
IDFERIGKLAKEVGAIHMVDMAHYSGLIAAGVYPNPVPHADVVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAIFPGLQGGPLMHVIAGKAAAFKEALEPSFIDYQKQVIVNAKALAETLM
ERGLRIVSGGTDSHVMLVDLRAKKMTGKEAERVLGEAHITCNKNGIPNDPEKAMVTSGIR
LGSPAMTTRGFKEAEARQVGHFIADVLDNPTDPDNIAKVRAQVSALTKRFPVYG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccgccaaaacaccctagctaaaacggatcccgaattatgggcctcgattcag
aatgaaaatcagcgtcaagaagaccatattgagctgattgcctcagaaaactatacctcc
cctgcggtaatgcaggcccagggctctcagttgacgaataagtacgctgaaggctatcca
ggcaagcgttattacggcggttgtgaatttgtggacgtagctgagcaactggcgattgac
cgtgtcaaacttttatatggtgccgaggcggcaaacgtacagccccattgcggcgcttct
gctaatcaagcggtatttttagcctttttgaagcccggcgatacctttatgggaatgagt
ctggctgaagggggtcacttgacccacggtatggccctcaatatgagtggcaagtggttc
aacccgattgcttacggcctagataagaatgaagaaattgattacgagcagatggagcgt
ttagctcgagagcacaaacccaaactcatcatttcaggggcttctgcttattctagaaaa
attgattttgagcgtatcggtaaattggcaaaagaagtgggtgctattcacatggtggat
atggcgcactattcaggtctgattgctgcgggcgtttatcccaatccagtgccacacgct
gatgtcgttacttcgactacccacaagagtttgcgtggtcctcgtggtggcattattttg
atgaaagctgaacacgaaaaagccatcaattctgcaatctttccgggcctacaaggtggc
cccttaatgcatgtgattgcaggaaaagcagcagcttttaaagaggccttagagcccagc
tttatcgactaccaaaagcaagtgattgtgaatgccaaagcattggcagaaacattaatg
gagcgtggcttacggattgtgtctggcggtacagattcccacgtgatgttggtagatcta
cgcgctaaaaaaatgaccggtaaggaagcggagcgtgtactaggtgaagcacacattact
tgtaataaaaatggcattccaaacgacccagaaaaggcaatggtaactagtggtattcgt
ttgggatcaccagcaatgaccacgcgtggctttaaagaagccgaggcaagacaggtgggg
cattttattgctgatgtactagacaacccaacggatccagacaacatcgcgaaagtgcgt
gcgcaagtttcagccttgaccaaacgttttccggtctacggttaa
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