Polynucleobacter sp. TUM22923: TUM22923_02960
Help
Entry
TUM22923_02960 CDS
T10645
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TUM22923_02960 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_02960 (xseA)
Enzymes [BR:
polt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
TUM22923_02960 (xseA)
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TUM22923_02960 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
VMAP-M1
DUF1508
WASH_WAHD
Motif
Other DBs
NCBI-ProteinID:
BDX20975
LinkDB
All DBs
Position
286848..288062
Genome browser
AA seq
404 aa
AA seq
DB search
MSELLREILSVGDLNRAIASSLEERFDAVWVSGEISNFKAYDSGHWYFSLKDEEGQIRCV
MFRGRNSQVGFMPQSGDLVEVGASLGMYVPRGDIQLTIQTLRRAGMGGLYEAFLKLKARL
AKEGLFDQERKREIPTHPRSIGIITSLQAAALKDVLSTLARRAPHTPIVIYPTLVQGPEA
PSGIIAALKAAEKENAVDVILLVRGGGSIEDLWAFNDEQLAYAIAQSPIPIVSGVGHETD
TTIADFVADLRAPTPTGAAELAAPRRDQMLQELDSIKQALVQRIHQRVEREAQTLDQFAL
RLSHALPNPERMREQIQHWQQRLNQAWLVRVDSWQRNQSHYARQLEMLNPQRTLERGYAV
VLNAKEGLQAVRNPDELDIHSEFQIRLADGVANVKFAALESRKL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattattaagagaaatcttgagtgttggcgatctgaaccgtgccattgcgagc
tcgcttgaagagcgctttgatgccgtctgggttagcggggagatttcgaatttcaaggca
tatgacagtgggcactggtatttttccctaaaggacgaagaaggtcagattcgttgcgtg
atgtttcgtgggcgtaacagccaagtgggctttatgccccaatcgggtgatttagtagag
gttggcgctagcctgggtatgtatgttcccaggggagacattcagctcactattcaaacc
ctgcgacgcgctggtatgggtggtctatatgaagcctttttaaaactcaaggcaagatta
gctaaagagggtctctttgatcaagagcgcaagcgcgagatcccgacacaccccagatct
attggcattattacttcactccaggccgcagctttaaaggatgtgttgagcaccttagcc
agaagagcgccccacacgccaattgttatttaccctaccttagtgcagggtccagaggcg
ccttcagggattattgcagccctaaaagcggccgaaaaagaaaacgcagtcgatgtcatc
ttattggtgcgtggcggtggcagcattgaggatctgtgggcgtttaatgatgagcaatta
gcttatgccattgcgcagtctcctattccgattgtgagtggggttgggcacgagacagac
acgacgattgccgactttgtggccgatctaagagccccaacgccaacgggcgcagcagaa
ttagcagcgccacgtcgagatcaaatgctgcaagaactggattcaatcaagcaggcgctt
gtacaaagaattcatcagcgcgttgagagagaggcgcaaactttagatcagtttgctttg
cgcttaagtcatgcgctacccaaccccgagcggatgcgcgaacaaatacagcactggcag
cagcgcctcaatcaggcttggttagtcagagtagattcttggcaaagaaatcagtctcac
tatgcgcgccaattggaaatgctcaacccccagagaaccctagagagaggttatgccgtg
gtactcaatgccaaggagggcttacaggctgtacgtaacccggatgagctagacatccat
tccgagtttcagattcgtttagccgatggagtggctaatgtgaaatttgcagcactggaa
tcgcgtaagctttaa
DBGET
integrated database retrieval system
