Polynucleobacter sp. TUM22923: TUM22923_03910
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Entry
TUM22923_03910 CDS
T10645
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03018
RNA degradation
Brite
Enzymes [BR:
polt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TUM22923_03910 (rhlE)
Messenger RNA biogenesis [BR:
polt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TUM22923_03910 (rhlE)
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NCBI-ProteinID:
BDX21070
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Position
376168..377691
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AA seq
507 aa
AA seq
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MINTVPEINTPTEDAQSVTPEVTITFADFGLDPQIQKAVSEQGYTIPTPIQAQAIPHVLA
GRDLMGAAQTGTGKTAAFVLPIIQQILRHASSSSSPARHPIRALVLTPTRELAVQVAENA
ASYSRHTHLRSAVVYGGVDMKEQVTTLRGGVEILIATPGRLLDHLGSKVANLSQVEILVL
DEADRMLDMGFLPDLQRIIDLIPAQRQTLLFSATFSPEIKKLAQSYLRTPVTVEVARQNA
AADTVKQVVHMVASADKQQAIVRVLEARTLQGLSRQCIIFTNSRLGCARLARSLERDGIK
AGAIHGDKSQGERTLTLDAFKSGAIEALVATDVAARGLDIPSMPCVINHELPFNAEDFIH
RIGRTGRAGSKGDAIALVDASEKRLLDDIEKLMKRKLDVAPLPGSNASGYSPSSSSESRS
TSRSTSTSNSRSSSRSTGSSSGASTYASKSPSQVVDPFFYKPYEATAPKVTAADAADGVN
AKPAEIKVGITPAKPSVGALLGGFKKK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttgataaatactgttcctgaaataaacacccctacggaagatgcacagtccgtaactccc
gaagtaacaattacttttgctgattttggcttagacccgcagattcaaaaagcggtgtct
gagcagggttacaccattcccaccccaattcaagcgcaagccattcctcatgtgctggct
gggcgtgacctgatgggcgcagcccaaacgggtactggtaaaacagccgcatttgttttg
cccatcattcagcaaattttgcgtcacgccagtagtagctcctctcctgcgcgtcaccct
attcgtgccttagtactgacgcctacgcgcgagctagcagtgcaggttgcagaaaatgca
gccagctattcacggcatacccatcttcgctccgccgttgtttatggtggcgtggatatg
aaagaacaggtcactacattgcgtggtggtgttgagattttgatcgccacaccaggccgc
ctactcgatcacctggggtcaaaggtagccaatctttcgcaggtagaaattttagtttta
gatgaagcagatcgaatgctagatatgggatttttacccgatctacagcgcatcattgat
ctcattccagcgcaacgccaaacccttttgttctcagccacattctctccagagattaag
aagctagcgcaaagttatctgcgtactccagtcactgtggaagtggcgcgtcagaatgcg
gcggcggatactgttaagcaagtagtccacatggtggctagtgcagataagcaacaggcg
attgttagagtcttagaggcgagaacgctgcaaggtttatcgcgtcagtgcatcatcttt
accaatagtcgcttaggttgcgcccgcttagcacgctctttagagcgagatggcattaag
gctggcgcgattcatggagataagagccagggtgagcgtactctgactttagatgcattt
aaatccggtgcaattgaagccttggtagcgacagatgttgctgcgcgtggcttggatatt
ccatcgatgccttgcgtgattaaccatgagttaccgtttaacgctgaagactttatccat
cgtattggccgcacagggcgcgctggtagcaagggcgatgccattgctttagtggatgct
agtgaaaaacgcttattagacgatattgaaaagctcatgaagcgtaagcttgatgtcgcg
cctttaccggggagcaatgcttcaggctattcaccttcatcttcatctgaatcaagatca
acatcaagatcaacatcaacatcaaattccagatctagctctagatccacagggtcatca
tctggcgcctcaacttatgcttccaagtcgcccagtcaagtagtagaccccttcttttat
aagccctatgaagctacagcacctaaagtgactgccgcagatgctgctgatggtgtcaat
gccaagcctgcagaaattaaagtaggcattactcctgccaagccctctgttggggcttta
cttggtggttttaaaaagaagtaa
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