Polynucleobacter sp. TUM22923: TUM22923_04850
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Entry
TUM22923_04850 CDS
T10645
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TUM22923_04850 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
polt03019
]
TUM22923_04850 (recQ)
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_04850 (recQ)
Enzymes [BR:
polt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TUM22923_04850 (recQ)
Messenger RNA biogenesis [BR:
polt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TUM22923_04850 (recQ)
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TUM22923_04850 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
HRDC
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDX21164
LinkDB
All DBs
Position
487996..489831
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AA seq
611 aa
AA seq
DB search
MNQIHQVLRHVFGFDQFRGTQESIVQHVVDGGDALVLMPTGAGKSLCYQIPSITRAGVGV
IVSPLIALMQNQVDALTQLGVKAAFLNSSLDAQESQLVTSRLLAGDLDLIYVAPERLLSN
SFLFTLDKLNASSGIALFAIDEAHCVSQWGHDFRPEYRQLTILHERFPNVPRIALTATAD
APTRAEIVERLSLESAKQFVSSFDRPNIRYRVLQKNSAKQQLEQFLEAEHSDDCGIIYCL
SRRSVEDTAQWFVDRGWDAMPYHAGLSIEIRNANQKRFLREEGVIMVATVAFGMGIDKPN
VRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVNLRQMVDSGEASEDRKRV
ERQKLNALLGYCESITCRHQGILRYFGEAHPGKCNHCDNCLEPVATWNATQEVQKALSCV
YRTGQQFGVTHLIDVLLGKSTPRIQQYFHQSVSTFGIGQELNQAQWSSIYRQLVAGGYLD
ADIASYGGLKLVSAMALPILRGEQEIWLRKDPASVKTKAAKVGGVKAAVYSFTNAAEETL
WLALKAKRTDLAREQGVPPYVIFHDSTLQEIMKIAPRNLQEFSHISGVGRAKLERYGTQF
IDVVEEILSGD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatccatcaagttcttcgtcatgtttttggttttgatcagtttcgcggcacc
caagagtctatcgtccaacatgtagttgatggcggtgatgcgctagtgctgatgccaacc
ggtgccggtaaatctttgtgttatcaaattccttcgattacccgtgctggggttggggtg
attgtttcccctttaattgcacttatgcaaaatcaggttgatgcgctgacccagttaggg
gtaaaggctgcgttcttaaactccagtcttgatgcacaagaatcccaattagtaactagt
cgattgttggctggggacttagatttaatctatgtcgcgcctgagcgcctgcttagtaat
agctttttatttaccctggataagttaaatgctagctctggcattgcattgtttgctatt
gatgaggcgcattgtgtctcgcagtggggtcacgattttcgtccagagtatcggcaatta
acaatcctgcatgaacgctttccaaatgtaccgaggattgcgttaacagcgaccgcagat
gcgcctactcgagcagaaatcgtagagcgtttatccctggagtctgccaaacaatttgtt
tctagttttgataggccaaatattcggtatcgggtgctacaaaaaaatagcgctaaacaa
cagttagagcagtttttagaagcggagcactcagacgattgcggcattatttattgctta
tctcgccgcagtgtggaggataccgcgcagtggtttgtagatcgtggttgggatgcgatg
ccctatcacgccggcttaagtatcgaaatccgcaatgccaatcaaaagcgttttttgcgt
gaagaaggtgtcatcatggttgccacggtagcgttcggcatggggattgataaacccaac
gttcgttttgtggcccacctcgatttgcctaaaagcatggagggctactatcaagaaacc
ggtcgggctggtcgcgatggcttacctgcaaatgcttggatggcctatggtttaggggat
gttgtgaatctgcggcagatggtggactctggtgaggcttctgaagatcgcaaaagagta
gagcgtcaaaagctcaatgctctcttgggttattgcgaatccattacttgccgacatcaa
ggtatcttgcgatattttggtgaagcacatcctgggaaatgcaatcactgtgataactgt
ttggagcccgttgcaacgtggaatgcaacgcaagaggtgcaaaaagcgctatcttgcgtt
tatcgaacagggcagcagtttggtgtaacccatttaattgatgttttgcttggcaagtct
acgccgcgcattcagcaatattttcatcaaagtgtcagtacgtttggcattggccaagaa
ctcaatcaagcacagtggagtagcatctaccgtcaattggtggcgggaggttatctagat
gccgatattgcttcttatggcggtttaaagctggttagcgcgatggctctacctatattg
cgtggcgagcaagagatttggttgcgtaaagatcctgccagtgtaaagactaaggctgct
aaggtgggaggcgtcaaagcagcggtttactcatttacgaatgctgccgaagaaacgctg
tggttggccctaaaagcaaaaagaacagacttggcccgagagcaaggcgttcccccttat
gtcatttttcatgacagcaccttgcaggagattatgaaaatcgccccaagaaatttgcaa
gaatttagtcacattagcggggtaggtcgggctaaattagagcgctatggcactcaattt
attgatgtggtcgaagagattctctcgggggattga
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