Polynucleobacter sp. TUM22923: TUM22923_05340
Help
Entry
TUM22923_05340 CDS
T10645
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
polt Polynucleobacter sp. TUM22923
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
polt03009
]
TUM22923_05340
Enzymes [BR:
polt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
TUM22923_05340
Ribosome biogenesis [BR:
polt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TUM22923_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BDX21213
LinkDB
All DBs
Position
540046..541887
Genome browser
AA seq
613 aa
AA seq
DB search
MTSHNDNDSTPIKPASDNAANQKSATDTPAADGVKTEGREDRPRRPRRQGSSNRDGNGNS
NGNSNGNSSGSARHAANKKRPPNKDRPRREGGDAQGIREGGAHSAAKLAPNPAESEALFA
SVVSGEFDAALDAPEAVQVQNQDGVNESEISHQTGAERNAQRVRHDEDADVPSDDEMSSL
QFANIDDLPLSLRNEVWSDLDGLDDEADDEDTVKLHKVLADVGMGSRRDMEDLIIQGRVS
VNGLPAHIGQRIGPTDQVRINGKPVHRKIQTKPPRVILYHKPAGEIVSQSDPEGRPTVFD
RLPKPRQGRWIAVGRLDFNTEGLLLFTTSGELANRLMHPRYGVEREYAVRILGELSQENT
SLLKTGITLDDGQAKFLRLSMGGGDGANRWYHVALNEGRNREVRRMFEAVGHTVSRLLRT
RYGIFLLPPRLRRGKWEELEAGGIYNLMKSAGLRMPQPTDKGRSPHAQGRDRQSAPVGDF
QPDPMQTSVSYWGSRDALTMASGHHELTHQGRGGKPGGGVPAEGRGPFRGRTQGGRPGSP
GRGGQGGQGGRSAEGGQGQNRGKGGGGKVHHGQSAFVTASPQNPGNGPKRGAPKGRKPFN
KGPRKPRNPSESF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccataacgataacgattccactccgatcaagccagcatcggataacgccgca
aaccaaaaatctgctactgataccccagccgctgatggagtgaagactgagggtcgcgag
gatcgcccacgtcgcccacgccgtcaaggttctagcaacagagatggtaacggcaacagc
aatggcaacagtaacggcaacagctctggctcggccaggcatgcggcaaataaaaaacgt
ccaccaaacaaagatcggcctcgtagagaaggtggtgatgctcaaggtatccgcgagggt
ggagcgcattccgccgctaagcttgcgcctaatccagctgagagtgaggctttgtttgct
tcggtagtttctggtgagtttgatgcagccctagatgcgccagaagctgtgcaagttcag
aatcaagacggtgtgaatgagagtgaaatttctcatcaaacgggtgctgagcgtaatgcg
caacgtgtacgtcatgacgaagatgctgatgttccgagcgatgatgaaatgagtagtttg
cagtttgcaaacattgatgacttgccactcagtctacgcaatgaagtttggtctgaccta
gatggtctagatgatgaggctgacgacgaagatacggtcaagctgcataaggtcctagcg
gatgtcggtatgggctcgcgtcgcgacatggaggacttgattattcaagggcgtgtctct
gttaatggattgcctgcacacatcggccaacgtatcggaccaactgatcaagttcgcatc
aatggcaagcccgttcatcgcaagattcaaactaaaccaccccgtgttattttgtatcac
aagcctgcaggcgaaatcgtgagtcagtccgatcctgaaggccgcccaacagtatttgac
cgtttacctaaaccaaggcaaggccgttggattgcggttggccgtttggacttcaataca
gaaggtttgttgttatttactacttctggtgaattggctaaccgcttaatgcatcctcgc
tatggagttgagcgcgagtatgccgtccgaattctgggtgagttaagtcaagaaaataca
tccttattaaagacaggcattactctggatgacggccaagcgaagtttttgcgcttatcc
atgggtggtggcgatggtgcaaatcgctggtaccacgttgctttgaacgaaggacgtaac
cgtgaggtacgtcgtatgtttgaggcggttggtcataccgtgtctcgtctgctacgtact
cgctatggaatatttttattgcctcctcgcttaagacggggaaagtgggaagagttagaa
gctggtggcatttacaacttaatgaaatcagcgggcttgagaatgcctcagccaacggat
aaagggcgcagtccacatgctcaagggcgtgatcgacaatctgccccagtgggtgatttc
cagccagatccaatgcaaacctcggtttcttattggggttctcgtgatgctttgacgatg
gccagtggacatcatgagttaacccatcaaggtcgaggcggcaaacctggtggtggtgtg
ccggccgaaggtcgtggcccgtttaggggtcgtactcagggcggacgccccggttcccct
ggtcgtggaggtcagggtggccagggtggacgaagtgcagaaggcggccaaggtcagaat
cgtggcaagggcggaggcggtaaagtgcatcatggtcagtcggcttttgtgactgccagc
cctcaaaatcctggaaatggccctaaacgcggagcacctaaggggcgaaaaccctttaat
aaagggcctcgaaagcctagaaacccaagcgaaagcttctga
DBGET
integrated database retrieval system
