Polynucleobacter sp. TUM22923: TUM22923_05390
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Entry
TUM22923_05390 CDS
T10645
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
polt Polynucleobacter sp. TUM22923
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
polt03016
]
TUM22923_05390 (truB)
Enzymes [BR:
polt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TUM22923_05390 (truB)
Transfer RNA biogenesis [BR:
polt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TUM22923_05390 (truB)
Prokaryotic type
TUM22923_05390 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BDX21218
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All DBs
Position
547330..548175
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AA seq
281 aa
AA seq
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MTAVKRALNADKAGHTGTLDPMATGLLPICLGEATKYSQDLLDADKTYIAQVKFGQCTDT
GDAEGLVTQEFPLPIFTDEAALRFALDALLPEFTGPISQVPPMYSALKRDGKPLYEYARA
GVELERAAREITIHAIRWTNIQWPEATLEVSCSKGTYIRVLAEDLGKTLGCGAHLVGLRR
TEVGHLNLEQSFTIENIQQGLQESSSYILPVDALLQTLPHLTIDEQQAKRLGLGQRVPLS
IPSIEALVRIYRATAAPHNFIGTADWRSGVLHPKRLISQTS
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctgtcaagcgcgctcttaatgcagacaaagcaggtcatacaggcactctagat
ccgatggctactggactactcccgatttgtttaggggaggctactaagtactctcaagat
ttattggatgcggataagacatatattgcgcaagttaaatttggtcaatgtactgatact
ggtgatgccgaaggtctcgttacccaagagttcccgctgccgatatttactgatgaggca
gcattgaggtttgccctagatgcgctgctaccagaatttactggccctataagccaggtt
cctcctatgtactcggcgctaaagcgcgacggtaaacctttgtatgaatatgcacgtgca
ggtgttgagttagagcgtgctgcccgagagattacgattcatgcgattcggtggaccaat
attcaatggccagaagccactttagaagtgagttgcagcaagggaacttatattcgggtt
ttggccgaagacctcggtaagactttgggttgcggggcgcacttagtgggcttacgccgc
actgaagtaggccacttaaatttagagcagtcttttacgattgagaatattcagcagggg
ctgcaagagagttcaagctatatattgcctgtcgatgccttgcttcagactttgccgcac
ctgacaattgatgagcaacaagctaaacgccttgggctaggtcaacgggttccgttgagt
attccgtccattgaggctttagtgcggatttatcgcgctactgctgcccctcacaacttt
attggtacagccgattggcgttcaggggttttacacccgaagcgactcatctcacagacc
tcttaa
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