Polynucleobacter sp. TUM22923: TUM22923_07710
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Entry
TUM22923_07710 CDS
T10645
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt00061
Fatty acid biosynthesis
polt00071
Fatty acid degradation
polt01100
Metabolic pathways
polt01212
Fatty acid metabolism
polt02024
Quorum sensing
polt04146
Peroxisome
Module
polt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TUM22923_07710 (fadD)
00071 Fatty acid degradation
TUM22923_07710 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TUM22923_07710 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUM22923_07710 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
polt01004
]
TUM22923_07710 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
polt04147
]
TUM22923_07710 (fadD)
Enzymes [BR:
polt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TUM22923_07710 (fadD)
Lipid biosynthesis proteins [BR:
polt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TUM22923_07710 (fadD)
Exosome [BR:
polt04147
]
Exosomal proteins
Exosomal proteins of breast milk
TUM22923_07710 (fadD)
Exosomal proteins of breast cancer cells
TUM22923_07710 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BDX21450
LinkDB
All DBs
Position
778950..780638
Genome browser
AA seq
562 aa
AA seq
DB search
MVTNPLFPWLDHYPDGIPHQIDLAMESLGCQSLVDLFEESFSKYPQRTALEFMGVSISYG
QLDKLSQHFATYLQTLGLESGARVAIMLPNVPQYLIAMLGTLRAAYVVVNVNPLYTSREL
EHQLRDSGSEALIILENFATTYDAIAVHRLVKQVIVTSVGDAIGSKGKVVDFVARYVKKM
IPPWKFPHIRFNAAIKIGQHHEFHRPQVGMDDVAFLQYTGGTTGVSKGAVLLHRNVLANI
VQIELWLNPALERRGDEQLAFLCALPMTHIFALTACAFLGIRKGGLLLLIANPRDIDGFI
QFLINHPGIHIFPGVNTLFHALIHRPDFLKVKLPHLLVTIGGGMAVQKKTADLWHQLTGV
PIAQGYGLSETSPVVCVNTPIITQFTGSIGMPLPATDVRILDDEGAELPFGEAGEIAIKG
PQVMAGYWNQAQETQQCMTADGYFKSGDIGIMTPEGHVHIVDRKKDMIVVAGFKVFPNEI
EEMISQLAGVRECAVIGMPHRKLGEIVAVYIVKDHPELSQAQVIEYCKLHMTSYKRPRKV
MFIDEMPKSNVGKILRRHLRNR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggtgactaatcctttatttccttggcttgaccattatccagatggcattccccatcag
attgatctcgctatggaatcgctgggctgccaatctttagttgatctatttgaagaatct
ttttctaaatatccacagcgtactgcactggaatttatgggtgtatctatttcctatggg
caattagataaattatcccaacactttgcgacttatctgcagactctaggattagagtcc
ggcgcacgtgttgccatcatgcttcctaatgtgccgcaatatcttattgccatgttaggt
acgctgcgtgcggcttatgttgttgttaacgttaatcctctttatacctctcgtgagtta
gagcatcaattacgcgatagtggttctgaggcactcattattttggaaaactttgccact
acttatgacgcaattgctgttcatcgtttagtcaaacaagtcatcgttaccagcgtaggt
gatgctattggatctaagggtaaggtagtcgattttgtagcgcgttatgtgaagaaaatg
attccaccttggaaatttcctcacatacggtttaatgcagcaatcaagataggtcagcac
cacgagtttcatcggccacaagtgggtatggatgatgtggcctttttgcaatatacgggt
ggcactacgggggtatccaaaggtgctgtgctgttgcatcgcaacgttctggcaaatatc
gttcagattgagctgtggctaaaccctgcgcttgagcgtagaggagatgagcagttagcc
tttttgtgcgcattgccgatgacccatatttttgctctaacagcgtgtgcttttttaggt
attcgtaagggcgggctcttactgctcatagctaatccacgagacatagatgggtttatt
caatttctgatcaatcatcctggcattcacatctttccaggcgtcaatacgctttttcat
gcgctgattcatcggcctgattttcttaaagtaaagctaccgcatttattagtcactatt
ggtggcggtatggccgtacaaaaaaagactgccgatctctggcatcagctgacgggagtg
ccgattgctcagggttatggcttatctgaaacttcacctgtagtgtgcgtcaacaccccc
atcattactcaatttaccggttcgattggtatgccgcttcccgctacggatgtccgcatc
ttggatgatgagggtgctgagctaccgtttggtgaggctggagaaatcgccattaaaggc
cctcaggtcatggccggttactggaatcaggcccaagaaacacagcaatgcatgacggct
gatggctattttaaatcgggtgatattggcatcatgacgcccgaagggcatgttcatatt
gtcgatcgcaaaaaagacatgattgttgtggcaggctttaaagtgtttccaaacgagatt
gaagaaatgatttctcaattggctggggtaagggagtgcgcagtcatcggtatgccacat
cgaaagcttggagagatagtcgctgtctacatcgttaaagatcatccagagctgtcgcaa
gcgcaagtaattgaatactgcaagctacacatgaccagctataaacgacctagaaaagtg
atgtttatagatgagatgcctaaatctaacgttggcaagatattgcgacgacatctacgc
aatagataa
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