Polynucleobacter sp. TUM22923: TUM22923_07800
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Entry
TUM22923_07800 CDS
T10645
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt00730
Thiamine metabolism
polt01100
Metabolic pathways
polt01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
TUM22923_07800 (thiC)
Enzymes [BR:
polt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
TUM22923_07800 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BDX21459
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All DBs
Position
complement(787620..789566)
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AA seq
648 aa
AA seq
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MSDTNKKSKAEIPSLKSLERDFGQKFAYPASTKTYLEGSRPDIKAPIRMIEQLSTLVGKE
MVANPPVPVYDTSGPYSDPEIVINLEKGLPLLRKNWIEERNDTEQLAGPSSDYGVARSQD
TETAHLRFAHIGAPRVAKAGSNVSQMYYARKGIITPEMEYVALRESMGLEQLRKNPEYKQ
LLKQHPGKSYGANLPEIVTGEFVRSEIAAGRAIIPANINHPELEPMIIGRNFRVKINGNL
GNSAVTSSINEEVEKMVWSIRWGADTIMDLSTGKHIHETREWIIRNSPVPIGTVPIYQAL
DKTGGVAEDLTWEMFRDTLVEQAEQGVDYFTIHAGVLLRYVPLTADRITGIVSRGGSIMA
KWCLAHHKENFLYTRFDEICEIMKAYDVSFSLGDGLRPGCIADSNDAAQFGELHTLGELT
AKAWKHDVQVMIEGPGHVPMQRIEENMTEELKHCLEAPFYTLGPLITDIAPGYDHITSGI
GAAQIGWYGTAMLCYVTPKEHLGLPDKEDVRTGIITYKIAAHGADLAKGLPGAQLRDNAL
SKARFEFRWEDQFNLGLDPERAREYHDATLPAEGAKIAHFCSMCGPKFCSMKITQEVREY
AATLDADGNPKVSKVIPIIADADQASQAAAGMEEMSAEFRKRGSEIYQ
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataccaataagaaatcaaaagccgaaatcccaagtttaaagagcttagagcgt
gactttgggcaaaaatttgcctacccagcctctactaaaacttacctagaaggttcccgc
cccgatattaaagcgccgatccgcatgatcgagcagctatccactcttgttggcaaagag
atggtggctaatccgccagtcccggtctacgacacctcaggcccctacagtgatcccgag
attgtgatcaatttagaaaaaggcctgcctttattgcgcaagaattggattgaagagcgt
aatgatactgagcagctcgctgggccctcatctgattacggcgtagctcgatctcaagat
actgaaactgcgcatctgcgttttgcccatatcggtgcaccacgagtggctaaggcaggt
agcaacgtcagtcaaatgtattacgcgcgcaaaggcatcatcacaccagagatggaatac
gttgcactgcgtgaatccatgggcctagagcagttacgcaagaacccagaatacaagcag
ctcctcaagcaacatcctggcaaaagctacggtgccaatctgcctgaaatcgtcaccggt
gaatttgtgcgctctgaaatcgccgcaggtcgcgcgattattcccgcgaacattaatcac
cctgaattagagccaatgattattggccgtaatttccgtgtcaagatcaatggcaatctg
ggcaactcggcggttacttcctcaatcaatgaggaagtagaaaagatggtctggtctatt
cgttggggcgcagacaccatcatggatctttccactggtaagcatattcatgaaacgcgt
gaatggattattcgcaattctccagtaccgattggtaccgtccccatttatcaggcgcta
gataaaacaggtggcgttgctgaagacctcacctgggaaatgtttcgcgacactctggtt
gagcaagctgagcaaggcgtggactacttcacgattcatgcaggggtattgctacgttac
gttccattaaccgctgatcgcattacgggcattgtgtctcgtggtggatccatcatggcc
aagtggtgtttagctcaccataaagaaaacttcctgtacacccgctttgacgaaatttgc
gagatcatgaaagcctatgacgtgtcatttagtttaggtgatggcttgcgtccaggctgt
attgcagactcgaatgatgcggcgcaatttggagagctgcatacactgggtgaactcaca
gctaaagcatggaaacatgatgtgcaagtcatgattgaaggtcctggccacgttcctatg
caacgcattgaagagaatatgactgaggaactcaagcattgcttagaagcgcccttttat
accctcggaccattgattactgatatcgctcctggatacgatcacatcactagtggtatt
ggtgctgcgcaaattggttggtatggcacagccatgctttgttatgtcacacctaaagag
catttaggcttgccagataaagaggatgtgcgcaccggcatcattacctacaaaattgca
gcccatggcgcagaccttgctaaaggcctacctggtgctcaattacgagataacgccttg
tcaaaagcgcgctttgagttccgctgggaagaccaatttaatttgggcctagatcctgag
cgagcccgcgaatatcacgatgcgactttgccggctgagggcgccaaaattgctcacttc
tgctctatgtgtggtccaaagttctgctcgatgaaaatcacgcaagaagtacgtgaatac
gctgcaactttagatgcggatggcaatccaaaggtctctaaagtcattccgattattgct
gatgccgatcaagcaagccaagcggctgccggaatggaagagatgtctgcagaatttcgt
aagcgcggtagtgaaatttatcagtaa
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