Polynucleobacter sp. TUM22923: TUM22923_08100
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Entry
TUM22923_08100 CDS
T10645
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
polt Polynucleobacter sp. TUM22923
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
polt03009
]
TUM22923_08100 (rimO)
Enzymes [BR:
polt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TUM22923_08100 (rimO)
Ribosome biogenesis [BR:
polt03009
]
Prokaryotic type
ribosomal protein modification factors
TUM22923_08100 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BDX21489
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Position
821939..823297
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AA seq
452 aa
AA seq
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MVGKVGFVSLGCPKALVDSELILTQLSAEGYETSKDYSGADLVVVNTCGFIDSAVEESLN
AIGEALAENGKVIVTGCLGARKNADGSDLIQSIHPKVLAVTGPHATAEVMQAIHLHLPKP
HDPFIDLLPPIGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLLEAKRL
FESGVKELLVVSQDTSAYGVDIQYRTGFWDGKPVKTKMYDLVNALNQIAREHQAWVRLHY
VYPYPHVDDVLPLMAEFSDHGYGVLPYLDIPLQHSHPDVLKRMKRPASGEKNLERIQAWR
AACPDLVIRSTFIAGFPGETEEEFEHLLHFLDEAQIDRAGCFAYSPVDGATANALDNPVP
ELVREERRARFMAKAEEISIRRLSKKTGKRIQVLIDRVDESGGIGRTIGDAPEIDGLVRV
LPANKPSKRYRAGEIIKATVISTQGHDLIAET
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggtcggaaaagttggttttgtatccttgggatgccccaaggcattagtagattctgag
ctcatattgacgcagttaagtgctgaaggttatgagacatcaaaagattattcaggcgca
gatttagtggtagtcaatacctgcggctttatcgattctgcggttgaggaaagtctgaat
gccattggcgaggctttggcagaaaacggcaaagtgattgtgactggatgcttaggtgcg
cgtaagaacgccgacggtagtgatcttatacagagcattcatcctaaagtacttgctgtg
acaggccctcatgccacggcagaggtgatgcaggcaattcatttacatcttcctaagcca
catgatccttttatagatctgttgccacccattggtgtaaagcttacgcctaagcattac
gcttatctgaaaatttctgaaggctgcaatcaccgttgcactttctgcatcattccgagt
atgcggggagacctggtgtctcgccctatcggtgaggtattgctcgaagcaaaacgattg
tttgagtctggtgttaaagagcttttggttgtttcgcaagataccagcgcctatggtgta
gacattcaataccggacgggattttgggacggtaaacctgtcaaaaccaagatgtatgac
ttggtcaatgcgctcaatcaaattgctcgtgagcatcaagcttgggtacgccttcattat
gtttatccttatccccacgtcgatgatgttttgcctctcatggctgaattttccgatcat
ggttatggcgtattgccctatttagacattcctttgcagcattcccacccagacgtgctt
aaacgcatgaaacgtccagcgagcggggaaaagaatttggagcgcattcaggcttggcgt
gctgcttgcccagacctggtcattcgcagtacctttattgccggctttccgggtgaaaca
gaggaagaatttgagcacttactgcattttcttgatgaagcgcagatcgatagagcgggt
tgctttgcctactcgccagtagatggcgcaaccgctaatgcccttgataatccggtacct
gagttggttcgtgaggaacgtcgggctcggtttatggccaaagcagaggaaatttcaatt
aggcgcttaagcaaaaaaacaggtaagcggatacaagttctcattgatcgggtagacgag
tctggtggaattggccgcactattggtgacgcccctgaaattgatggtttggttcgggtt
ttacctgcgaataagccttctaagcgctatcgtgctggtgagattatcaaggcaacggtt
attagcacccaagggcatgacctaatagctgaaacttga
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