Polynucleobacter sp. TUM22923: TUM22923_08270
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Entry
TUM22923_08270 CDS
T10645
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt00541
Biosynthesis of various nucleotide sugars
polt01100
Metabolic pathways
polt01250
Biosynthesis of nucleotide sugars
Module
polt_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
TUM22923_08270 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
polt01005
]
TUM22923_08270 (kdsA)
Enzymes [BR:
polt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
TUM22923_08270 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
polt01005
]
Lipid A
TUM22923_08270 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
PEP_mutase
Nudc_N
Motif
Other DBs
NCBI-ProteinID:
BDX21506
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Position
849281..850144
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AA seq
287 aa
AA seq
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MSSFKLCGFDVGLNQRFFLIAGPCVIESEQSAMDIAGQLKEITSSLGIPFIYKSSFDKAN
RSSGTSFRGLGMEKGLEILARVKREIGVPVLTDIHDISEIEPVSKVVDVLQTPAFLCRQT
DFIRACAQSGKPVNFKKGQFLSPHEMLNVIDKARDAAIEAKLADQFMVCERGASFGYNNL
VSDMRSLAILRDTKAPVVFDATHSVQLPGGQGQSSGGQREFVPVLARAAVAVGISGLFME
THPDPSKALSDGPNAVPLNRMKDLLESLVAIDLIVKKPGVFLEDSFK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatttaagttatgcggatttgatgttgggttaaaccagcgatttttcttgatt
gccggtccttgtgtcattgagtcagagcagtctgctatggatattgctggccaactcaaa
gagatcaccagctctttgggtattccctttatttataaatcttcatttgataaggctaat
cgctcttctgggacatcctttcgcggactgggaatggaaaagggccttgaaattttggct
agagtaaagcgggaaattggcgttccggtactgacggatattcatgacatcagtgaaatt
gaaccagtatcaaaagtagttgatgttctccaaacgccagcttttctttgccgtcaaacg
gatttcattagggcttgtgctcaaagtggtaagccggtgaattttaagaagggtcaattc
ctatccccccatgaaatgctcaatgtgattgataaagcgcgtgatgctgctattgaagca
aagcttgccgatcaattcatggtttgtgagcggggcgcttcttttggctataacaactta
gtatctgacatgcgtagtttggcaattttgcgcgatacaaaagctcctgtcgtatttgat
gcaacccattcagttcaactgccagggggtcaaggtcaatccagtggtggtcaacgtgaa
ttcgtccccgtattggctcgtgctgcagtagcggttggtattagtggtctttttatggag
acccatcctgatccatcaaaagcattatcagacggccccaacgcagtgccactgaatcga
atgaaggacttgcttgaatcattggtggcgattgatctcattgtaaaaaaaccaggggta
tttctggaagacagttttaagtag
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