Polynucleobacter sp. TUM22923: TUM22923_09880
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Entry
TUM22923_09880 CDS
T10645
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03030
DNA replication
polt03430
Mismatch repair
polt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM22923_09880
03430 Mismatch repair
TUM22923_09880
03440 Homologous recombination
TUM22923_09880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polt03032
]
TUM22923_09880
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_09880
Enzymes [BR:
polt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TUM22923_09880
DNA replication proteins [BR:
polt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TUM22923_09880
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TUM22923_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_16
RuvB_N
AAA_14
AAA_5
AAA_22
AAA_2
AAA_18
AAA_30
Glyco_tranf_2_5
AAA_19
AAA_24
nSTAND3
TsaE
Mg_chelatase
AAA_assoc_2
SKI
NTPase_1
RNA_helicase
AAA_28
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
BDX21667
LinkDB
All DBs
Position
complement(1011757..1013430)
Genome browser
AA seq
557 aa
AA seq
DB search
MTALALARSWRPKTFSQLVGQDHVVKALTHALDQGRLHHAWLFTGTRGVGKTTIARIMAK
ALNCTGEDGQGRMTSEPCGKCPACLEIDAGRFVDYIEMDAASNRGVDEMAQLLEKSAYAP
SNARYKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTILSRCLQFNL
KQMPVPLIVEHLEKVLAAENVAYETNALRVLAKAAQGSMRDALSLTDQAIAYAAGKVSEE
AVRGMLGTLDDAYLIRILDSLISKDGATLLAIANEMGERSMSFSLALADLSSLIQKIAAA
QIVPESVLEDWPEAAEIRRLATVLSKEEAQLFYQISITSRPDLSLAPDEQTGFAMTLLRM
LAFRPGNDVPNGPNAPRSGGSPSVGNTPKPTAPTALAASASLRSVPASTSASAAPVPAMT
TPPAPTPSSADRPDWHALMRQLPFKGMVQQLAFQTELQEWHDSAAGVRATIVTPMPQLAS
DASVGRLADVLSAHFGKPVKVIIEKGAVEVKTVAKVDAQIHQEKRQNAEQMIAQDPFIQQ
LEREFGATVVGGSVKPL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacagctttagctttagcccgttcgtggcgccctaaaacattctcccaattggtggga
caagaccatgtagttaaggccttgacccatgctctagaccagggccgccttcaccatgcc
tggctctttacaggcactcgcggggtaggtaagactactattgcccgaattatggcaaaa
gccctcaattgcaccggggaagatggccaaggtcgcatgacttcagagccttgtggaaaa
tgcccggcttgcttggaaatcgatgcaggtcggtttgttgactacattgaaatggatgcc
gcaagtaatcggggtgtcgatgagatggcccagctattggaaaagtccgcttacgcaccc
agtaatgcgcgttacaaggtttacatgattgatgaggtgcatatgctcaccaatcatgcc
tttaatgccatgctcaagactttagaagagccaccagagcacgtcaaatttattctagca
accactgaccctcaaaagattccagttaccattttgtcgcggtgtctgcagttcaatcta
aaacaaatgccagtgcctttaattgttgagcacttagaaaaggtactcgctgcagaaaat
gtggcttatgaaaccaatgcattaagggtattggccaaggcggcacaaggctcgatgcgg
gacgcgctctcattgacggaccaagccattgcctatgctgctggcaaagtttctgaagag
gctgtacgtggcatgcttggtactcttgatgacgcctacctcattcgcattcttgactct
ttaattagcaaagatggtgcaacgcttttagcaattgctaacgagatgggtgagcgaagt
atgtctttctctttggcattagccgatttatcaagtttgattcagaaaatagctgctgct
caaatcgttcctgaatccgttttagaggattggccagaagcagcagaaattcgtcgtttg
gccactgtattaagcaaggaagaggctcaactcttctatcaaattagcatcaccagtcgt
cctgatttatcactagcgcctgatgagcaaactggatttgccatgacgctcttgcgtatg
cttgcctttcgtcctggaaatgatgtgcctaatgggcccaatgcgcctagatcgggcggt
tcaccttccgtcggaaatacccccaaaccaacagctccgacagcgctagccgcatctgct
tccttaagatctgtgcctgcctccacctcagcatcggctgccccagttccggccatgaca
acgccaccagccccgactccttccagcgctgatcgcccagactggcatgccttaatgcgt
cagttaccgttcaaaggaatggttcagcaactagcgtttcaaactgagcttcaagagtgg
catgattctgctgcgggtgtgcgtgcaacgattgtgactcccatgccacagcttgcttca
gatgcttcagttggtcgcctggcagatgtcttgagtgcacactttggtaagccggtgaag
gtcatcatcgagaagggtgcagtcgaagtgaagacggttgccaaggtagatgcccagata
caccaagagaaaagacaaaatgctgagcaaatgatcgctcaagatccattcattcagcag
ttggaaagagagtttggggcaacggtcgttggtggttctgtgaagccgctataa
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