Polynucleobacter sp. TUM22923: TUM22923_12260
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Entry
TUM22923_12260 CDS
T10645
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TUM22923_12260 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_12260 (recO)
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TUM22923_12260 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TUM22923_12260 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BDX21905
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Position
complement(1243910..1244644)
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AA seq
244 aa
AA seq
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MASIRVADEPAFVLHSIPYKETSLILDVFTRQYGRMALIAKGAKRPHSVLRPVLQRFQPL
LVSWSGKSELRTLTKSEWVGGTPSLVGDALLCGFYLNELLVKFLAREDDYERLYDHYTDT
ISALSNLEFQSKGLEEILRPFELTLLQETGYAAALDRCVETNSAPISSEQYVYQPERGVR
PAQSDDPGHWPVLSGRSLLAITVGDFSDVDTLAESKQLMRFLLGLHLQDQVLTTRQILID
LKKI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcttctattcgggttgctgatgaacctgcttttgtcctgcacagcattccttataag
gagaccagtttaattctggatgtttttacgcggcagtatggtcgtatggccttgattgct
aaaggtgctaagcgcccacactctgtattgcgcccagttttacagcgatttcagcctctg
ttagtttcctggagtggtaaatcagagctcagaacgttgactaaatcagagtgggtaggc
ggcaccccctctctggtgggcgatgccttactttgtggtttttatctcaatgaattgctg
gtgaaatttctagcgcgtgaagatgattacgaaagactgtatgaccactacaccgacacc
atctctgcactgtctaatctcgagtttcaatctaagggtttagaagaaattctgcgtcca
tttgagttaacgctgctgcaggagacgggttatgctgcagccttagatcgctgcgtcgag
accaacagcgccccgatatcgagtgagcagtatgtctatcaacccgagcgtggtgtgagg
ccagcacagagtgatgatcccggccattggcccgttcttagcggcagatctttgttggcc
attactgtgggtgacttttctgatgtggatactcttgctgagagtaagcagctgatgcga
tttttactgggcctacatttgcaagatcaagtgttgacaacccgtcaaattttaattgac
ctcaagaaaatctag
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