Polynucleobacter sp. TUM22923: TUM22923_12280
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Entry
TUM22923_12280 CDS
T10645
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TUM22923_12280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
polt03019
]
TUM22923_12280
03009 Ribosome biogenesis [BR:
polt03009
]
TUM22923_12280
03036 Chromosome and associated proteins [BR:
polt03036
]
TUM22923_12280
Enzymes [BR:
polt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
TUM22923_12280
Messenger RNA biogenesis [BR:
polt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TUM22923_12280
Ribosome biogenesis [BR:
polt03009
]
Eukaryotic type
90S particles
RNase
TUM22923_12280
Prokaryotic type
rRNA processing factors
TUM22923_12280
Chromosome and associated proteins [BR:
polt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
TUM22923_12280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BDX21907
LinkDB
All DBs
Position
complement(1245591..1246382)
Genome browser
AA seq
263 aa
AA seq
DB search
MNARAVMATGPLQAQLGYTFKKLELLNQALTHRSHSKKNNERLEFLGDSILNCVVAEMLY
ERYADLDEGDLSRVRANLVKQQALYEIAQSLSLSDYLRLGEGELKSGGFRRPSILADTLE
AVTGAIFLDGGFDAAKICLRRLYSIILANVDPKTLGKDDKTLLQECLQSYQLPLPTYNVT
GTTGAAHNQQFEVECLIPSLKVSVKGDGASRRAAEQSAAKLALVLAQKALLQELGKPKKT
RAAKKNAAKKVATEEQLNLKLKG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcgagccgtgatggcaactggtcctttgcaggcccagttgggctataccttt
aaaaaattagagttgcttaatcaggccctaacgcatcgtagtcatagcaagaaaaataat
gagcgtttagagtttttaggagactccattcttaattgcgtcgtcgcagaaatgctctac
gagcgctatgcagatttagatgagggtgacctttcacgtgtgcgtgctaacttagttaag
cagcaggctctgtatgagatcgctcaatcactctccttatcagactatctacgtctgggg
gaaggtgagctcaagagtggcggatttcgtcgaccatccattctggctgacacgttagag
gctgttactggggcaatcttcttggatggtggatttgatgctgccaaaatctgtttgcgt
cggctctattcgattattttggctaatgtagatcctaagactttaggaaaggatgacaag
actttgttgcaagagtgtctgcagagctatcagttgcctttgccaacctataacgttacc
ggaactactggcgcggcacacaatcagcaattcgaggtggagtgtttaattcccagcttg
aaggtatcggttaaaggtgacggcgcgtcacgtcgcgctgcggaacaatctgctgcaaaa
ctggcattagtgctggcacaaaaagccttgctacaggagctgggtaagccgaaaaaaacg
cgcgctgcaaaaaagaatgcagcaaaaaaagtagcaacagaagagcagttaaatcttaag
ctgaagggctaa
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integrated database retrieval system
