Polynucleobacter sp. TUM22923: TUM22923_12810
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Entry
TUM22923_12810 CDS
T10645
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
polt Polynucleobacter sp. TUM22923
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polt03032
]
TUM22923_12810 (ihfB)
03036 Chromosome and associated proteins [BR:
polt03036
]
TUM22923_12810 (ihfB)
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_12810 (ihfB)
DNA replication proteins [BR:
polt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TUM22923_12810 (ihfB)
Chromosome and associated proteins [BR:
polt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
TUM22923_12810 (ihfB)
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
TUM22923_12810 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
ThiS
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BDX21960
LinkDB
All DBs
Position
complement(1296477..1296821)
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AA seq
114 aa
AA seq
DB search
MSDQEQQAITRSELVESLAEQFPQLLPRDVELAVKTLLDTMTHALAEGKRIELRGVGSFV
LHHRPARTGRNPKSGEKVLIPEKRVPHFKPGKELRERVDYKPLKQVSPKEGSGG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcaagagcaacaagcaattactcgttcagagttggtagagagtttggcggag
cagtttccgcagttgctgcctagggatgtcgagttagctgtaaagactttattggacact
atgactcatgccttagctgaaggtaaacgtattgagttgcgtggtgttggtagttttgta
ttgcatcatcgtccggcgcgtactggtcgtaaccctaaatctggtgagaaagtactcatt
ccagagaagcgagttccccactttaagcctggcaaagaacttcgtgagcgtgttgattac
aagccgcttaagcaagtgagccccaaagagggttctggtggttag
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