Polynucleobacter sp. TUM22923: TUM22923_13690
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Entry
TUM22923_13690 CDS
T10645
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03030
DNA replication
polt03430
Mismatch repair
polt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TUM22923_13690
03430 Mismatch repair
TUM22923_13690
03440 Homologous recombination
TUM22923_13690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polt03032
]
TUM22923_13690
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_13690
Enzymes [BR:
polt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TUM22923_13690
DNA replication proteins [BR:
polt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TUM22923_13690
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TUM22923_13690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GIY-YIG_UvrC
Cho_C
UvrC_M
GIY-YIG
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BDX22048
LinkDB
All DBs
Position
1373860..1375281
Genome browser
AA seq
473 aa
AA seq
DB search
MKTPSDDFPEIAFVDIETTGSNFERDRITEVGIVTLHNGEVDVWEQLINPETFIPSNIQA
LTGIRPDMVANAPNFEEISRALSKKLEGKIFVAHNARFDYGFLKASFKRVGIDFKPKVLC
TVKLSRKLFPNQVRHNLDTLIQAHQLKVSSRHRALGDADLLLQFWNCCISKLGSEELYGA
AQSLLGNSSLPSHIDPDLMNLLPEKPGVYIFYGENKMPIYIGKSISIRTRVLSHFQSALS
KRKEMNLAMQVRDIDWIETAGEIGALLLESKLIKERLPTLNVKLRRSKDLCAWQLTTNSA
GVLIPELVTHHQLKPGRQDNLFGLFYSRREAKIMLSSIAERNHLCLGLLGLEKLTKDQPC
FGYQVKKCQGACIAKESYEIHNIKLATVLEKFKVAHWTYQGPIGIQEGNVVHIIDHWCYL
GTAMNEEEIAELLESGEPEFDLDIYKLIQKSLRTIAKSRVFELTSTLHQRQVG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccatcagacgattttccagaaattgcttttgttgatatagaaacaaccggg
tctaattttgagcgggatcgcatcacagaagttggaatcgtcacactacacaacggtgaa
gtagatgtttgggagcaactcataaacccagagacatttattccaagcaatattcaagcg
cttaccggtatccggcctgatatggtggccaatgctccaaactttgaagaaatcagtcgc
gcattatctaaaaaattagaggggaagatttttgttgctcacaatgcccgctttgattat
ggattcttaaaggcatccttcaagcgcgtggggattgacttcaaacccaaagtactgtgt
accgtcaagctgtcacgtaagctttttccaaatcaagtaagacataacctagatacctta
atccaggctcatcaactgaaagtgagcagtcgtcaccgcgccctaggagatgctgattta
ttactgcaattttggaattgctgtatcagcaagctaggctcagaagagctctacggtgcc
gctcaatctttattgggaaactcaagcctacctagccatattgatccagatctcatgaat
ctattacctgaaaaacctggggtctatattttttacggtgaaaataaaatgccaatctat
attggcaaaagtatttcgattcgtacccgcgtattgagccattttcaaagcgccctttct
aaacgaaaagaaatgaacttagccatgcaagtaagggacattgactggatcgagacagcc
ggtgaaattggtgctctgttactagaatccaagctcatcaaggagcgattgcccacgctg
aatgtcaagttaagaagatccaaggatttatgtgcctggcaattaactaccaattctgct
ggtgtcctcattccagagttggtaacccaccatcaactgaagcccggaagacaagataac
ctttttggacttttttacagtcggcgtgaggcaaaaataatgctcagttcgatagctgag
cgaaatcacttatgccttggcctgctaggccttgaaaagcttacaaaagatcaaccctgc
tttgggtatcaagtaaaaaaatgccaaggtgcctgtattgccaaagaatcatatgaaata
cacaacattaaacttgctacggttcttgagaaattcaaggtagcccactggacttatcag
ggaccaattggcatccaagaggggaatgtggttcatatcattgatcactggtgctattta
ggtaccgccatgaatgaagaagaaattgcagaattattagaatctggtgaacctgagttt
gatctggatatctacaagctgattcagaaaagcttacgtaccattgctaaatctagagtg
tttgagctcacttctacacttcatcaaagacaagttggctag
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