Polynucleobacter sp. TUM22923: TUM22923_13880
Help
Entry
TUM22923_13880 CDS
T10645
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
polt Polynucleobacter sp. TUM22923
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
polt03016
]
TUM22923_13880
Enzymes [BR:
polt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TUM22923_13880
Transfer RNA biogenesis [BR:
polt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TUM22923_13880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BDX22067
LinkDB
All DBs
Position
1391388..1392872
Genome browser
AA seq
494 aa
AA seq
DB search
MGKKYSRVHHRFTRSDLAHIASIAMQERGLEPEFSPEVHNQLDLINAPGQDQDPAIVDLS
GLLWCSLDNDDSRDLDQLTASIALENGSTKIFVAIADVDAVIKKHSPIDEHAKLNTASIY
TSARIFPMLPEKLSTNLTSLNPDEIRLALVTEMTISKEGLVEDSQIYRARVINKAKLAYD
AISAWIEGVGSAPTALCSVKGMEEQLHTQDQVAQVLRKRRHDAGSLHLEVFQPKAIFKNE
AIVGIQEQVQNRGRQLIEEFMIAVNESTAHFLLKHRVPSLRRVVRSPDRWLRIVELARQY
GDVLPADPDSKALSEFLARRLKLDPIRFPDLSLVVVKLMGPGEYVLERPGAEAIGHFGLA
VQDYTHSTAPNRRYPDLITLRMIKAILQKQPLAYDATELLILAEHCTKQEDAIRKVERRV
RKSEAALFLEPYIGKTFDGIITGIAPNNGWVRIFNPPAEGMLMSRTQLADIGRKVHVQLV
STNVELGFINFALI
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaaatattctcgagtgcaccaccgttttacgcgctctgacctggcacacatt
gcgagtattgcaatgcaagaacggggtcttgagcctgaattttcaccggaagtacacaat
caactggatttaattaatgcaccagggcaggatcaggatccggcaatcgtagacctttct
ggcttgttatggtgctcgttagacaacgatgactctcgcgatttagatcaattaacagca
tctatcgcactcgaaaatggctctaccaaaatttttgtagctattgccgatgtagacgct
gttattaaaaagcactccccgattgatgagcatgcaaagcttaataccgcatcgatttat
acctctgcacgcatttttccaatgcttccagaaaaactctccactaacctcacctcttta
aatccagatgaaatccgtttggccttggtcacagaaatgactatttctaaagaaggtttg
gtcgaggattcccaaatatatcgcgcccgagtgatcaataaggctaagctagcttatgac
gctatctccgcctggattgagggtgttggctctgcacctactgcattgtgctcggttaaa
ggcatggaagaacagctgcatacccaagatcaagttgcgcaagtactccgtaagcgtcgg
cacgatgcaggctctcttcatttagaagtttttcaaccaaaggccatttttaagaatgaa
gccattgttggcattcaggagcaagtgcagaatcgtggtcgtcaattaattgaagagttc
atgattgcggtaaatgaaagcaccgctcactttttactaaagcaccgagtgccatcccta
cgtagagtggttcgtagcccagatcgctggctcagaatcgtcgaactagcaaggcagtat
ggcgacgttcttcctgctgatcctgactccaaagctttatctgaatttctggcaagacgc
ttaaaactagaccctattcgatttccggatctctctttggtagtcgtcaagctcatgggt
ccaggagaatatgtactggagaggccaggagcggaagccattgggcactttggcctagca
gtgcaagactacacccactctaccgctcctaatagacgctatccagacctcattacgctc
agaatgattaaagccattctgcaaaaacagcccctcgcttatgacgctacagaattacta
atactggcagagcactgcaccaaacaggaagatgccattcggaaggtagagcgaagagtg
cgtaaatcagaagcagcactcttcttagagccttacattggcaaaaccttcgatggcatc
atcaccggaatagctccaaacaatggctgggtccgaatcttcaaccccccagcagaggga
atgttaatgagtcgaactcaacttgctgacatcggtagaaaagtacatgtgcaactcgta
tctaccaacgtagagctggggtttattaacttcgcgctaatctag
DBGET
integrated database retrieval system
