Polynucleobacter sp. TUM22923: TUM22923_13980
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Entry
TUM22923_13980 CDS
T10645
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
polt Polynucleobacter sp. TUM22923
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_13980
Enzymes [BR:
polt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TUM22923_13980
DNA repair and recombination proteins [BR:
polt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TUM22923_13980
Prokaryotic type
TUM22923_13980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
BDX22077
LinkDB
All DBs
Position
complement(1397560..1399053)
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AA seq
497 aa
AA seq
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MRCQDHAALAQAARLGAVRCIYVVEPELWLQPDMALQHFEFVHESLKVLDADLRLQGGYV
EIHQGELTEVLQRLWQEAPFHRLHSHEETGNGFTYSRDLKVAAWCQAHQVHWAEYPQFGV
VRGLKNRNLWQGAWEKHMAAPMQHPVGLTFWKCPGLDLLRMQAPNHLQHNPSQRLRGGRA
LALATLHSFLNARSLGYRGGISSPLSAPNACSRISVYLAWGCISMREVVQQTYEYMEQLP
PQASRHRAGLSAFVSRLYWHCHFIQKLESEPAIEWRNMHSGYDGLREHDFNQAHFEALKA
GRTGWPMVDACVVMLRETGWLNFRMRAMLVSVAAYPLWLHWRPVGEWLATQFLDYEPGIH
WSQLQMQSGTTGINTARVYNPIKQAQDHDPHGRFVRQWLPHMRTVPNTWLFEPWLMTPQL
QADAGVQVGVEIAAPIVDLSLATKESKNRLHSRRQQPEVRAGKQGVVERHASRKKPIKRK
SPLLKKSDSKEQLGFDF
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctgtcaggatcacgctgcactggcgcaagctgcacgtctgggtgctgtgcgttgt
atctatgttgttgagcctgagctttggctgcagccagacatggctttgcaacattttgag
tttgtacatgagtcattgaaggtgctcgacgcagaccttcgccttcaaggtggctatgta
gagattcatcagggtgagctaaccgaggtattacagcgcctgtggcaagaggctcctttt
caccgcctgcattcacacgaagaaactgggaacggctttacttattcgcgtgatttaaaa
gtggccgcatggtgtcaagcacatcaagtacattgggctgagtatccacagtttggcgtt
gtgcgaggcttaaaaaaccgcaatttatggcagggggcatgggaaaagcacatggcagct
cctatgcaacatccagtgggcctcactttttggaagtgtcctgggttagatcttttgcgg
atgcaggctccaaatcacctgcagcacaacccttcacaacgattaagaggtggaagggcg
cttgcccttgcaacgctacatagctttttaaatgcccgcagcctaggttatcgagggggt
atctcttcgccgctgtcggctcccaatgcttgttcgcgcatatccgtatatttagcttgg
gggtgcatcagcatgcgcgaagttgtgcagcaaacctatgaatatatggaacagttacca
ccacaagctagcagacatcgagcaggcttatctgcttttgtcagtcgtctttattggcat
tgtcactttattcaaaagctagaaagcgagcctgcgattgagtggcgaaacatgcactct
ggttacgatgggcttcgtgagcatgattttaatcaagcgcattttgaggccctcaaggca
ggtagaaccggttggccgatggtggatgcctgcgttgtcatgttacgagaaacggggtgg
ttaaattttcggatgcgggcgatgttggtttctgttgccgcctatcctttatggcttcat
tggcgcccggtaggggagtggttagccacgcagtttctagactatgagccaggtattcat
tggagccaactgcaaatgcagtcgggtacgacggggattaataccgcccgggtttacaac
cccattaaacaagctcaagatcacgaccctcatggccgttttgtgcggcagtggttgccg
catatgcgcacagtgcctaatacctggttgtttgagccttggctaatgacgccacagctt
caggcagatgctggcgttcaagttggggttgagatagcggcgccaatagtggatctcagc
ttggctacaaaagagtctaagaaccggcttcacagtaggcgtcaacagccagaagtaagg
gctggcaagcaaggcgttgttgaaaggcatgcttcacgtaagaagccaattaaacgtaag
agccccttattaaaaaaatcggactctaaagagcaactaggctttgatttttaa
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