Polynucleobacter sp. TUM22923: TUM22923_14990
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Entry
TUM22923_14990 CDS
T10645
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TUM22923_14990 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
polt03019
]
TUM22923_14990 (pcnB)
Enzymes [BR:
polt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
TUM22923_14990 (pcnB)
Messenger RNA biogenesis [BR:
polt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TUM22923_14990 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
BDX22178
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All DBs
Position
1504738..1506138
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AA seq
466 aa
AA seq
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MITKLINRILRRDPMVRHTVAHTSGAPKRVPKKSHRIDPNLLSKNAVKVTHTLQQAGYDA
FIVGGAVRDLALGIGPKDFDVATNATPEQVQKLFRKSRLIGRRFQIVHVTFFGKGQPEII
EVSTFRALLENAGEHVAENGRILRDNVWGSQHEDAARRDFTINAMYYDPATETVLDYHGG
MADMQKKTLRMIGEPAKRYREDPIRMLRAIRFAAKTGFTLDAATHTPIAQLGKLIQDVPS
ARLFDEILKLLMSGYSWAAIQGLRNAGLHHGLLPLLDAILDNKVSSKEAKDFVRIALENT
DHRIQSGKSVSAGFLFATLLWPDLLSNWKKNIAAGLSNIPALHDAMDATIASQSNGMTIQ
RRFESDMREIWSMQPRFEKRVGRYPYRLIESPRFRAGYDFLLLRCANGEQNPALGQWWTD
FIGADPTDQDALMASVKNDSGNPAAPAKRRRRRKAKIAAPSEDTAS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgattacaaaattgattaaccgtattttgcgtcgcgaccctatggtgcgacataccgta
gcccatacttctggcgcaccaaaacgggtccctaaaaaatcccatcgcattgacccaaac
ctgctctctaaaaatgccgttaaagtcacgcatactttgcagcaggctggctatgatgct
tttattgtagggggcgcagtaagagatcttgccctaggcattggccctaaagattttgat
gtagcaacgaatgcaactccagagcaagtccaaaaattatttcgtaaatctcgtttaatt
ggtcgacgctttcaaattgtgcacgtaaccttcttcggtaaaggccaaccagaaattatt
gaagtctctacctttagagctttactagaaaacgctggtgagcatgttgcagaaaatggc
cgcattttgcgagacaacgtgtggggaagtcagcatgaagatgccgcccgccgtgatttc
acaatcaatgccatgtactacgacccggccaccgaaacggtccttgattaccacggcggt
atggccgacatgcaaaagaaaaccttgcgtatgattggcgagccagcaaaacggtatcga
gaagatccgattcgcatgttgcgcgccattcgttttgctgcaaaaaccgggtttacctta
gacgctgcaacacacacaccgatcgctcagttaggcaagctaatacaggatgtcccgtca
gcacgtctctttgatgaaattctaaaactcttgatgtcgggctattcctgggcggccata
caaggtttgcgcaacgccggattacatcacggactactaccgctactagatgctatttta
gataacaaagtaagctctaaagaagccaaagactttgtgcgtattgccctagagaacacg
gatcaccgtattcagtcaggcaaaagcgtatctgccggattcttatttgctaccttgcta
tggccagacctcttgagtaactggaaaaagaatatcgcagcaggactctccaatattccc
gcactacatgatgctatggacgcaacgattgccagccaaagcaatggcatgacgattcaa
agacgttttgagagcgatatgcgagaaatttggtctatgcagccccgctttgagaagcgc
gtgggtcgctacccatatcgcctgattgaatcaccacgtttcagagcgggttatgacttt
ttgctgctccgctgcgctaatggggaacaaaaccctgctttaggccaatggtggaccgac
ttcatcggcgctgaccctacagatcaggatgctttaatggcgagcgtaaagaacgatagt
ggcaatcctgccgcaccagccaagcgacgtcggcgcagaaaagccaaaatagcggcgcca
tctgaagatacggcaagctaa
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