Polynucleobacter sp. TUM22923: TUM22923_15350
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Entry
TUM22923_15350 CDS
T10645
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TUM22923_15350 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
polt03019
]
TUM22923_15350 (groL1)
03110 Chaperones and folding catalysts [BR:
polt03110
]
TUM22923_15350 (groL1)
03029 Mitochondrial biogenesis [BR:
polt03029
]
TUM22923_15350 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
polt04147
]
TUM22923_15350 (groL1)
Enzymes [BR:
polt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TUM22923_15350 (groL1)
Messenger RNA biogenesis [BR:
polt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TUM22923_15350 (groL1)
Chaperones and folding catalysts [BR:
polt03110
]
Heat shock proteins
HSP60 / Chaperonin
TUM22923_15350 (groL1)
Mitochondrial biogenesis [BR:
polt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TUM22923_15350 (groL1)
Exosome [BR:
polt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TUM22923_15350 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
TUM22923_15350 (groL1)
Exosomal proteins of breast cancer cells
TUM22923_15350 (groL1)
Exosomal proteins of colorectal cancer cells
TUM22923_15350 (groL1)
Exosomal proteins of bladder cancer cells
TUM22923_15350 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDX22214
LinkDB
All DBs
Position
complement(1550543..1552192)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVIFGDNARTKMVEGVNILANAVKTTLGPKGRNVVMERSFGGPIITKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTADIAGDGTTTATVLAQSIVREGMKYVVSGHNPMDLKRGI
DKAVSAAIEELKKISKPCTTTKEIAQVGSISANSDYSIGQRIAEAMEKVGKEGVITVEDG
KSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAILETPYVLLFDKKVSNIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNNIRGIIKTCAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKTTLEHLGQAKRIEVGKENTIIIDGAGDAKAIEARVKNVRVQIEEATSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVDDALHATRAAVEEGIVPGGGVALI
RAMQGIKGLKGDNADQDAGISIVLRAMEEPLRIIVSNAGDEASVVVNAVLASKGNNGYNA
ATGEYGDMVAQGVIDPTKVTKTALVNAASVAALLLTTDCAICEAPKDDSAGGMPDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtaatttttggagataacgcccgtaccaagatggtagagggtgtc
aatattctagctaatgcagtaaaaactactttaggcccaaagggtcgtaacgttgttatg
gagcgctcattcggcggtcctatcatcactaaagatggtgtgtccgtagcaaaagaaatc
gaactcaaagacaagctccaaaacatgggtgcgcagatggtgaaggaagtggcttctaaa
actgctgacatcgctggtgatggcacaacaacagcaaccgttttagctcaatctatcgtg
cgcgaaggcatgaagtatgtagtgtcaggccataacccaatggacttgaagcgcggtatt
gataaggcagtttctgctgcaatcgaagagctcaagaagattagtaagccttgtacaact
actaaagaaatcgctcaagtgggttcaatctccgcaaacagcgactacagtattggtcag
cgcattgctgaagctatggaaaaagtaggcaaagaaggtgttattaccgttgaagatggc
aagtcattggaagatgagttggaagtcgttgaagggatgcaatttgatcgcggttacctt
tccccttactttatcaaccaaccagaaaagcaagttgccattctagaaacaccatatgtg
ctcttgttcgacaaaaaagtaagtaacatccgtgacctgctgccagtactagagcaggta
gcaaagtctggccgtccattgttgattattgcggaagatgttgaaggcgaagccttggca
actttagtagtcaataacattcgcggcatcattaagacttgcgctgtaaaagcgcctggt
tttggcgaccgtcgtaaagccatgctggaagacatcgcgattttgactggcggtactgtg
atcgctgaagaaattggcctcactctcgagaaaacaacccttgagcatttaggtcaagct
aagcgtattgaagttggtaaagaaaacaccatcattattgatggcgctggcgatgctaaa
gcgattgaagcgcgcgtgaagaatgtacgcgttcagatcgaagaagctactagtgactac
gacaaagaaaaattacaagagcgtgttgccaaattggcaggcggtgttgcagtgattcgt
gttggtgctgctactgaagttgaaatgaaagaaaagaaagcacgcgttgatgatgcatta
cacgctactcgtgctgctgttgaagaaggtattgttcctggcggtggtgttgctttgatt
cgtgcaatgcagggtatcaagggtcttaaaggcgataacgctgatcaagacgctggtatc
agtatcgtattgcgcgcaatggaagagccactgcgcatcatcgtttctaatgcaggcgat
gaggctagcgtagtagtgaatgcagtattagctagtaaaggcaacaacggctacaacgca
gccactggtgagtacggcgacatggtagctcagggtgtgattgatccaactaaagtaact
aagactgccttagtgaacgcagcctctgttgcagcattgctgttgacaacggattgcgca
atttgtgaagcgccaaaggatgactcagctggcggtatgccagatatgggtggtatgggc
ggtatgggtggtatgggcggtatgatgtaa
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