Polynucleobacter sp. TUM22923: TUM22923_16200
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Entry
TUM22923_16200 CDS
T10645
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TUM22923_16200 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_16200 (ruvB)
Enzymes [BR:
polt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TUM22923_16200 (ruvB)
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TUM22923_16200 (ruvB)
RecFOR pathway proteins
TUM22923_16200 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
nSTAND3
AAA_22
Rad17
AAA_14
AAA_3
NTPase_1
AAA_18
TsaE
DUF815
RNA_helicase
AAA_33
AAA_24
AAA_17
ABC_tran
Bac_DnaA
AAA_28
NACHT
NB-ARC
Sigma54_activ_2
TniB
IstB_IS21
bpMoxR
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BDX22299
LinkDB
All DBs
Position
1633142..1634215
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AA seq
357 aa
AA seq
DB search
MAIHTEDLSAIPEDLPESTSDRLVSGAVGNSEAIFERALRPKQLDEYVGQTKARAQLEIF
IAATRAREEALDHVLLFGPPGLGKTTLAHIIARELGVNLRQTSGPVLDRPGDLAALLTNL
ETNDVLFIDEIHRLSPVVEEILYPALEDYSLDIMIGEGPAARSVKIDLKPFTLIGATTRA
GMLTNPLRDRFGIVARLEFYTTEELTKIINRSANLLKAKIDPAGSVEIAKRARGTPRIAN
RLLRRVRDYAEVKGTGVITKDIADAALKMLDVDPSGFDVMDRKLLEAILHKFDGGPVGID
NLAAAIGEERDTIEDVLEPYLIQQGYLQRTSRGRVATRQAYAHFGLTPPIGSIGSEG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcaatacataccgaagacttgagcgctattcctgaagacttaccagaatctacttca
gatcgactggtgagtggggctgttggtaattcagaggctatcttcgagagagccttacgc
ccaaaacagttagatgaatacgttggtcaaactaaggcgcgagcccaattagaaattttt
attgctgctaccagagcaagggaagaagcgctagatcacgtccttctctttgggcctccc
ggcctaggcaaaaccaccctggcacacatcattgcgcgagaattaggggtgaatttacgc
caaactagtggacccgtcttagatagacccggtgatcttgcagccctactcactaatctt
gaaactaatgacgtcctttttattgatgaaattcatcgtctttctccagtagtagaagag
attctgtacccagccctagaggactacagtcttgacatcatgatcggtgaaggccctgct
gcacgtagcgtgaagattgatctgaaacccttcaccttaattggtgcaacaacgcgcgca
ggcatgctaaccaacccgttacgtgatcgttttggcattgtcgctaggcttgagttctat
accaccgaagaactcaccaaaattattaatcgctctgccaatttactgaaagccaagatc
gatcccgctggttctgttgagattgctaaacgcgctcgtggtactcctcgcattgccaat
cgcttgctgcgtcgcgtacgagactatgcagaggtcaaaggcactggtgttatcaccaaa
gatatagccgatgccgcactcaagatgttagatgttgatcctagtggatttgatgtaatg
gaccgaaagttactcgaggctatcttgcataaattcgatggcggcccagttggcattgat
aacttagctgctgctattggtgaagagcgcgacactattgaagatgttctagagccctac
ttaattcagcagggatatttgcagcgtacctcgcgcggacgagtagccactcgccaagcc
tacgcccattttggactgacgccacccatcggatccattggctcagaaggctag
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