Polynucleobacter sp. TUM22923: TUM22923_16570
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Entry
TUM22923_16570 CDS
T10645
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
polt Polynucleobacter sp. TUM22923
Pathway
polt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TUM22923_16570 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_16570 (mutM)
Enzymes [BR:
polt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TUM22923_16570 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TUM22923_16570 (mutM)
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TUM22923_16570 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
PQQ
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
BDX22336
LinkDB
All DBs
Position
complement(1673548..1674384)
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AA seq
278 aa
AA seq
DB search
MPELPEVEVTRLGIKPHLNGRTISAVNVIDGRLRWPVPAQLGKWLPGQKVWGIERRGKYL
LIEMDAGYLLIHLGMTGTLRVLPSSDVLKTHDRVTFEFDELSLRLHDPRKFGAVLWHPKS
AGPVEKNTLLQKLGVEPLSPEFADELGTEILYRQSRKRSVAVKQFLLAGQAVVGVGNIYC
SESLFEAGIHPAKAAGKLTRPQCSRLAAAVRSILKKAIAAGGSSLKDFVNSAGDPGHFMM
QTKVYDRKDQACKVCQTPIRQIVQGQRSTYFCIKCQKR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactccccgaagtcgaagttacccgtttgggtatcaaaccccatttaaatggg
cgaaccatcagtgcagttaatgtcattgatggccgcttacgttggccagtccctgcgcag
ctaggaaaatggctgccagggcagaaagtctggggaattgagcgtcgtggaaagtactta
ttaattgaaatggatgcgggttatttgcttattcatttgggcatgaccggaactctgcgc
gtattgcccagtagcgatgtcctcaagacgcatgaccgcgtcacatttgagtttgatgag
ttgagcttgcgtttgcatgacccacgtaaatttggcgctgttctatggcaccctaaatcg
gcaggacctgtcgagaaaaataccctgttacaaaaattaggagttgagccattatcccca
gagtttgcagatgagctgggtacagagattttgtatcggcagtctcgtaagcggagtgtt
gcggtgaagcaatttttattggctggccaagcagtagtcggtgtaggtaatatttactgc
tcagaaagtttatttgaagctggaattcatcccgctaaggcggccggtaagttaacccgt
cctcagtgctctcgtttggccgctgcagtgcgttccattctgaaaaaagcgattgctgct
ggaggcagttcgctaaaagattttgtgaatagcgccggcgatccaggccactttatgatg
caaacgaaagtttatgatcgtaaagatcaggcatgtaaagtttgtcagaccccgattaga
caaattgtgcaaggtcaacgctccacatatttttgtattaaatgtcaaaaacgctga
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