KEGG   Polynucleobacter sp. TUM22923: TUM22923_17460
Entry
TUM22923_17460    CDS       T10645                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
polt  Polynucleobacter sp. TUM22923
Pathway
polt00300  Lysine biosynthesis
polt00470  D-Amino acid metabolism
polt01100  Metabolic pathways
polt01110  Biosynthesis of secondary metabolites
polt01120  Microbial metabolism in diverse environments
polt01230  Biosynthesis of amino acids
Module
polt_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:polt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    TUM22923_17460 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    TUM22923_17460 (dapF)
Enzymes [BR:polt01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     TUM22923_17460 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF DUF4514
Other DBs
NCBI-ProteinID: BDX22425
LinkDB
Position
1756893..1757747
AA seq 284 aa
MHGAGNDFIVLNGIDQDLSDIRPEQWQRLAHRQFGIGADQILLVEKSTRSDADFRYRIFN
ADGGEVEQCGNGSRCFVRFIQDQGLSNKNPLRVEVAHTILTLRSHSDGQVEVNMGAPIFE
HSQIPFDAKGLSSLQEFHETLFALHLKKPAPHDSWIGVVSMGNPHAVQVVGDINSAPVLE
EGPSIESHVAFPKRVNAAYMQILNRNEIQLRVYERGAGETLACGTGACAAVVSGIRRGLL
HSPVQVHTRGGDLTIAWEGIINDIIQPVIMTGPAVTVFEGETTI
NT seq 855 nt   +upstreamnt  +downstreamnt
atgcatggtgccggcaatgactttattgtgctcaatggcatcgatcaagatctgagtgat
atccgtcccgagcaatggcaaagactggctcaccgtcaatttggtattggtgcagatcaa
attttattggttgaaaaatctacgcgctcggatgctgattttcgttatcgaattttcaat
gctgatggtggagaagtagagcaatgcggcaacggctcacgttgctttgtacgctttatt
caagatcaaggactttcaaataaaaatcctctgcgcgttgaagtcgctcacaccattctt
actttgagatcccattcagatggccaggttgaggtcaatatgggagcgcctatttttgag
catagccagattccgtttgatgcaaaaggcctctccagcctgcaagaatttcatgaaacg
ctctttgcgcttcaccttaagaagcctgccccacacgatagttggattggcgttgtgtct
atgggaaacccgcatgcagttcaggtagtgggagatattaatagcgcacctgttttagag
gaagggccctctattgagagtcacgtcgcctttccgaaaagagtgaatgcagcttatatg
cagattctcaatcgcaatgaaattcaattgcgcgtctatgagcgtggcgccggcgaaacc
cttgcctgtggtacaggcgcatgtgccgctgtagtctccggtatacgccgaggcttactg
cactcgcccgttcaagtgcacacgcgtgggggcgacctcacgatagcttgggaaggcatc
atcaatgacatcattcagccagtgatcatgactgggcccgcagtgactgtatttgagggt
gagacgacgatctag

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