Polynucleobacter sp. TUM22923: TUM22923_17520
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Entry
TUM22923_17520 CDS
T10645
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
polt Polynucleobacter sp. TUM22923
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
polt03000
]
TUM22923_17520 (slmA)
03036 Chromosome and associated proteins [BR:
polt03036
]
TUM22923_17520 (slmA)
Transcription factors [BR:
polt03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
TUM22923_17520 (slmA)
Chromosome and associated proteins [BR:
polt03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
TUM22923_17520 (slmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
fvmX1
DUF6869
HTH_11
TRIM_CC
TetR_C_38
HTH_20
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
BDX22431
LinkDB
All DBs
Position
complement(1762284..1762937)
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AA seq
217 aa
AA seq
DB search
MSDPLEMTSGVEASVADAGTVRKRPRPGERRLQILQVLAEMLQNPKGERVTTAALAAKIQ
VSEAALYRHFASKAQMFEGLIAFIEQTVFGLINQINQKEESGLAQARGILQMLLFFAEKN
PGMTRVLLGDALFQEDDRLQERITQVLDRVEASLKQTLRIAQTQGGSWANVTQDEISVRA
TMLMSYVLGRWHRFARSGFKKLPTDASDMSLRLLLSE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcctttagaaatgacatcgggagttgaggcaagcgttgctgatgcaggcaca
gtgcgtaaacgcccgcgtcccggagagcggcgcttgcagattctgcaggtgttggcggag
atgttgcaaaatccaaaaggtgagcgtgtgacaacagctgccttagcagcaaaaattcaa
gtttctgaagcagccctatatcgtcatttcgccagtaaggcacaaatgtttgagggcttg
attgctttcattgagcaaacagtctttggcttaattaatcaaattaatcaaaaagaagaa
tctggcttggctcaagcaagaggtatcttgcagatgctgttgttcttcgcagaaaaaaat
ccaggaatgacccgggtgcttttgggtgacgcattatttcaagaggatgatcgtctgcaa
gagcgcattactcaggtgcttgatcgtgttgaggcatctctgaagcagacgctacgcatt
gcacaaacccagggaggatcttgggctaatgtgactcaagatgagatcagtgttcgggcc
acgatgttgatgagctatgttctgggtcgttggcatcgctttgctcgaagtggctttaaa
aagctaccaaccgatgcatctgatatgagccttcgccttcttctgtccgaatga
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