Polynucleobacter sp. TUM22923: TUM22923_17660
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Entry
TUM22923_17660 CDS
T10645
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
polt Polynucleobacter sp. TUM22923
Brite
KEGG Orthology (KO) [BR:
polt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
polt03032
]
TUM22923_17660 (hupB)
03036 Chromosome and associated proteins [BR:
polt03036
]
TUM22923_17660 (hupB)
03400 DNA repair and recombination proteins [BR:
polt03400
]
TUM22923_17660 (hupB)
DNA replication proteins [BR:
polt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TUM22923_17660 (hupB)
Chromosome and associated proteins [BR:
polt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TUM22923_17660 (hupB)
DNA repair and recombination proteins [BR:
polt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TUM22923_17660 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Urease_beta
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BDX22445
LinkDB
All DBs
Position
complement(1776290..1776574)
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AA seq
94 aa
AA seq
DB search
MNKAELIAAIAGDAEISKAKAEFALNSAIETIIKAVTKGDSVQLIGFGTFSSGKRAARMG
RNPKTGEPLKIAAAKTVKFSAGKAFKDSVNKRKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaagcagaactaatcgcagcgattgctggcgatgctgaaatctcaaaagctaaa
gctgaatttgcattaaattccgctatcgaaactatcattaaagctgttactaaaggcgac
tcagttcaactgattggttttggtacattctcttctggtaaacgtgctgcacgtatgggc
cgcaacccaaaaactggcgagccactcaaaattgctgccgctaagacagtgaagttctca
gctggtaaagcatttaaagattcagtaaacaagcgtaagaagtaa
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