Polynucleobacter sp. SHI2: PSHI2_00270
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Entry
PSHI2_00270 CDS
T10386
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSHI2_00270 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poly03400
]
PSHI2_00270 (priA)
Enzymes [BR:
poly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSHI2_00270 (priA)
DNA repair and recombination proteins [BR:
poly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSHI2_00270 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_16
Zeta_toxin
Herpes_ori_bp
AAA_30
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BDW09945
LinkDB
All DBs
Position
26152..28224
Genome browser
AA seq
690 aa
AA seq
DB search
MIVTIAIDVPIFQLFDYIWNQEELLQAPQIGDIVKVEFRKKITAGIVLQIDKKNSCANDQ
IRNLKPVLAIAPDLKVTTQVISLCQFSAKYYLKPLGETLFTSIPADWKRPNKWSLLQKQK
LKEQEKKQKKSKSDVAEYQWDLNEEQIKSLEYLQTSSKKNRFEITLLKGITGSGKTAVYL
TWLKEVLKDDNAQCLILVPEINLTPQLEKIVKQVFVNEEVSVLHSDISSAQRNLAWWKIE
NGISRVILGTRLSIFAPAKTIKAMVIDEEHDNSYKQQDGLRYHARDLAIWRAAELKIPIV
LTSATPSSETWHKVLQNKISLLTLNKKAKDGASLSTLNLIDLAVARKNKKINTYGITEEL
HEVITRTQKNNKQTLIYINRRGYAPILHCKTCSWKSSCNKCSAWMVVHKKIGSNRKLLQC
HHCGSNQYIPLSCPDCGNQDLETLGMGTQKIEEFLKETYPQIDLIRIDSDSTKSKGSADE
LFKKIHAGEPAIIIGTQMIIKGHDFQHIQSIIVMDVDKSLYSQDFRAIEKIFSQLVQVAG
RAGRGEAAEGSNIYIQTEFVDHPMFKALAEHQYDQFITDIVKERQDYQLPPYSHQALIIA
ESKNEQINNEVLNNLKQYLEHELPENIQISDPTPRVLQRLSGVDRNQILIETNDRVKLQK
TLEKALDYIEVIKKKSRSIKLLIDRDPLQF
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtaactatagctattgatgttcctatatttcaactatttgattacatctggaat
caagaggagttattacaagctccgcaaataggagatattgtaaaagttgaattcagaaaa
aaaattacagcaggtattgtcttacaaatagataagaagaattcgtgtgcaaatgatcaa
ataagaaatttaaagccagtattagcaatagcgcccgatttaaaagtaactactcaagta
ataagtttatgtcagttttcagcaaaatactatttaaaacctttaggggagacattattt
acaagcattcctgcagactggaaaaggccaaataaatggagcctattacaaaaacaaaaa
ttaaaagaacaagaaaaaaaacaaaaaaaaagcaaaagtgatgtcgctgaataccaatgg
gatttgaatgaagaacaaatcaagagcttagagtatttacaaactagttctaaaaaaaat
cgctttgaaataaccttattaaagggaataactggtagtggaaaaacagccgtatattta
acatggctaaaggaagtattaaaggatgataacgctcaatgtctgatactagttccagaa
ataaatttaacgccgcaactagaaaaaatagtaaaacaagtttttgtaaacgaagaggtt
tcagtgcttcatagcgacataagctcagcgcaaaggaatcttgcttggtggaaaatagaa
aatggaatatctcgtgtcatattgggcacgcgacttagtatatttgcaccagctaaaacc
attaaagccatggtcattgacgaagaacacgacaactcatataaacaacaagacggttta
aggtatcacgcaagggatttagcgatatggagagccgctgaactcaaaataccaatagtc
ctaacatctgctacaccatcttctgaaacatggcataaagttttacaaaataagataagc
ttattaacattaaataaaaaagctaaagatggagcaagcctttcaacattaaatctaatt
gatttagccgttgcaagaaaaaacaaaaaaattaacacatatgggataacagaagagtta
cacgaagttatcaccagaacacagaaaaacaataaacaaacactaatctatataaataga
agagggtatgctcccatattgcactgtaaaacatgttcttggaagtcaagctgtaataag
tgtagtgcgtggatggttgttcataaaaaaataggtagtaatagaaaattattgcaatgc
catcattgtggaagtaatcaatacatacctctcagttgtccggattgtgggaaccaagat
ttagaaacacttggaatgggaacacaaaaaatagaggagtttttaaaagaaacatatcct
caaatagatttaataagaattgatagtgactcaactaaatcaaaaggatcagctgatgag
ttatttaaaaaaatacatgcgggtgagcctgccataatcattggtacacaaatgattatt
aagggacatgattttcaacacatacaatcaattattgtgatggacgtcgataagagtttg
tactctcaagattttcgagcaattgaaaaaatattttcacaactagttcaagtagccgga
agagccggacgaggtgaagcagctgaaggttccaatatctatattcaaacagagtttgtg
gaccatccgatgtttaaagcattggcagaacatcagtatgatcagtttataacggatatt
gtaaaagagaggcaggattaccaactaccaccatattcacatcaggcactcattattgcg
gaatcgaaaaatgagcaaattaataatgaagtactaaataatttaaaacagtatttagag
catgagttgcctgagaatattcaaataagtgatccaacgcctagagttttacaacgatta
tccggggttgatagaaaccaaatattaattgaaacaaacgatagagttaaattacaaaaa
acacttgaaaaagcattggattatattgaggttatcaagaaaaaatcacgatcaataaaa
ttactaatcgatcgtgacccacttcagttttaa
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