Polynucleobacter sp. SHI2: PSHI2_00830
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Entry
PSHI2_00830 CDS
T10386
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00860
Porphyrin metabolism
poly01100
Metabolic pathways
poly01110
Biosynthesis of secondary metabolites
poly01120
Microbial metabolism in diverse environments
poly01240
Biosynthesis of cofactors
Module
poly_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSHI2_00830 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
poly04147
]
PSHI2_00830 (hemB)
Enzymes [BR:
poly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
PSHI2_00830 (hemB)
Exosome [BR:
poly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PSHI2_00830 (hemB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
BDW10001
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All DBs
Position
complement(79959..80978)
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AA seq
339 aa
AA seq
DB search
MSNTSCSTSLQYPLHRPRRARLNQWSRALIQETDLSPRNFIYPVFVLEGKGRREAVPSMP
GVERQSVDILLETAKQCVDLGIPVMALFPVIDSSLKTLDGAEAFNPNGLVPNAVKTLKDH
FPELGIMTDVALDPYTSHGQDGLIDESGYVLNEETTEVLVQQAICQARAGSDIVAPSDMM
DGRIIEIRDGLESEGFIHTQIMAYSAKYASAFYGPFRDAVGSSGNLGKGNKKTYQMDFCN
SDEAIREVALDISEGADMVMIKPGMPYLDIVRRVKDTFGYPTFAYQVSGEYTMIKAASQN
NWLDHDQVMMESLMAFRRAGADGILTYFALDAARLLLSK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatacttcttgctctacgtctttacaatatcctttacaccgcccccgcagggct
cgcctaaatcaatggtcaagagccttgattcaagaaacagacttgtctcctagaaatttt
atatatcctgtttttgtgcttgagggcaaaggacgccgagaggctgtaccttcaatgcct
ggggtcgaaagacaatccgtcgatatcttgttagaaaccgcaaagcaatgtgtagattta
ggtattcctgtgatggccctatttccggttattgattcatcattaaaaacactggatggt
gctgaagcttttaatccaaatggtctcgtacccaatgctgtaaaaactctcaaagatcac
ttccctgaattaggcattatgacggacgttgctctagatccatacaccagtcatggccaa
gatggcctgattgacgaatcaggttatgtgctcaatgaagaaacaacggaagtcttggtg
caacaggcaatttgtcaggcaagagctggatctgatattgtggcaccctccgatatgatg
gatggtcgtattatcgaaatccgtgatggcttagagtctgaaggttttattcatacccaa
atcatggcgtattccgcaaaatatgcgtctgctttttatggtccttttcgagatgccgtc
ggctcttcaggcaacttaggtaaaggcaataaaaaaacctatcaaatggacttttgtaat
tccgatgaagcaattcgtgaagtcgctcttgatatttctgaaggtgctgatatggtcatg
attaagccaggtatgccttatttagatatcgtgcgccgcgttaaagatacctttggatat
cccaccttcgcctatcaggtgagtggggaatatacgatgatcaaagctgcgtcacaaaac
aattggctggatcacgatcaagtcatgatggaatctttaatggcttttcgaagagcgggt
gctgatggcatcctcacttatttcgctttagatgctgcaagattacttctgtcgaagtaa
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