Polynucleobacter sp. SHI2: PSHI2_01540
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Entry
PSHI2_01540 CDS
T10386
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSHI2_01540 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poly03400
]
PSHI2_01540 (ung)
Enzymes [BR:
poly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PSHI2_01540 (ung)
DNA repair and recombination proteins [BR:
poly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSHI2_01540 (ung)
Prokaryotic type
PSHI2_01540 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDW10072
LinkDB
All DBs
Position
complement(145090..145848)
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AA seq
252 aa
AA seq
DB search
MFSSSVEAFLGRIPQDYCDLLHDFLSNEKNLPYLEQLVLQENEARLHFPDQIFPKKESVF
KALHQTPAKEVKVVLLGQDPYHSPGLAQGLAFSIPEHIPTNSRTYPSSLRNISKALFLDG
FETLPHGNLSSWADQGVLLLNTCLTVRQGEAHSHQHWGWDMLTNAIIQELSKDRPLIWML
WGKVAQKKAELIAPIQEHLILQASHPSGLGAYQTSEPFLLKGDVGSCGHFKQANQWLIQH
SYPPIVWSSSVF
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttcatctgtcgaagcatttttaggtcgaattccgcaggattactgtgattta
cttcatgattttttatctaatgagaaaaatcttccttatttagaacaattggtgcttcaa
gaaaatgaagctaggcttcattttcctgatcaaatttttccgaaaaaagaatccgttttt
aaagcacttcatcaaactcctgctaaggaggttaaggtagtacttcttggtcaggatccc
taccatagccctggtctagctcagggacttgctttttctattccagagcatattccgaca
aactctagaacttatcccagttcattacgaaatatcagtaaagctctttttttggatggc
tttgaaaccttacctcatggcaatttatcctcatgggccgaccaaggggtgttactttta
aatacctgccttacggttcgtcaaggtgaggcgcacagccatcagcactggggttgggat
atgctaaccaatgccatcattcaagaactgagtaaggatcgccctctgatttggatgctt
tggggaaaagtagcccagaaaaaagctgaactgattgctcccatccaagaacatcttatt
ttgcaagcttctcacccctctgggctgggagcctatcaaaccagtgagccatttcttctc
aaaggtgacgtgggatcttgtggtcattttaaacaagcaaaccaatggctgattcaacac
tcctaccccccaattgtttggtcttccagtgttttttaa
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