Polynucleobacter sp. SHI2: PSHI2_01790
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Entry
PSHI2_01790 CDS
T10386
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00470
D-Amino acid metabolism
poly00550
Peptidoglycan biosynthesis
poly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSHI2_01790 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSHI2_01790 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
poly01011
]
PSHI2_01790 (murD)
Enzymes [BR:
poly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PSHI2_01790 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
poly01011
]
Precursor biosynthesis
Amino acid ligase
PSHI2_01790 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_2
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
BDW10097
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Position
171026..172624
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AA seq
532 aa
AA seq
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MTNSNQTTFLIPGALPLKSSETFSILVMGIGESGQAMAKWAHAQGAQVAMHDTREQSVVS
SKIQEQLQEFQDLGIKITYGKQGAFSLQGIQMIALSPGISPLDSWIENLLNQAKEQGIVI
WGELDFFTQAINALKETQAYQPKVVAITGTNGKTTTTALCGVIFSKTGKSVAVAGNISPS
LLDKLTQCLVDHQLPDIWVLELSSYQLFYSQNFNPDAATVLNITEDHLDWHGDFDHYCAS
KKKIFGPTTIPILNRDDLKVMSMVDIDARDRLRTISFGIDTPQEPDQFGIVGDMNGGIDW
LAWIMPDEESGQRKRRRAKEVAHEYEQPIQIKRLIPTEALLIKGRHNATNTLAALGLGQA
IDLSMASLLHGLRDYRGEPHRVQSIAVIDDVEYIDDSKGTNVGATLAALNGLGATLGEKK
IILIAGGDGKGQNFSPLSDAIHRFVKHIYLLGKDAQQIEAVLNENLVSISHVATIEEAVD
LASKIGRAGDKILLSPACASLDMFKDYVHRAEVFSSAVDNISYQTHAIGVGL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacgaattctaatcaaaccactttcctcattcctggagctcttccgctgaaaagctcc
gagactttttctatcctagtaatgggaattggagaatctgggcaagcgatggctaaatgg
gcgcatgctcaaggtgcacaagttgccatgcacgatacgagagaacaaagtgtagtttca
tcaaaaatccaagaacaattacaagagttccaagacttaggcatcaagattacctatggt
aaacagggtgccttcagtttgcagggtattcagatgattgccctgagccctggtatttct
ccattagacagttggatagaaaatctattgaatcaagcaaaagaacagggtatcgtcatt
tggggtgaattagattttttcacacaggccattaatgcactgaaggaaactcaagcctat
caacctaaagtggttgcaattactggcactaacggtaaaaccacaaccactgcgttatgt
ggtgttatttttagcaaaaccggtaagtcagttgccgtagcaggaaatattagcccatca
cttttagataaattgacccaatgtcttgtagatcatcagttaccagatatatgggtatta
gagctttctagctatcagttgttttatagccagaactttaaccctgacgctgcgaccgtc
ttgaatattacggaagatcatttagattggcatggggattttgatcactactgtgcctcg
aagaaaaaaatatttggcccaactactattccaattctgaatcgtgatgatttaaaagtt
atgtcgatggttgatatagatgcgagagatcgtttgagaacgatttcatttggcatagat
accccacaagaaccagatcaatttggcattgtaggtgatatgaatggaggtattgattgg
ttggcgtggatcatgcctgatgaagaatctgggcaaagaaaacgtagacgagccaaagaa
gttgctcatgagtatgagcaaccaatacaaattaagagattgattcctacagaggcatta
ctcattaaggggcgtcataatgccaccaataccttggctgctcttggattagggcaggca
attgatttaagtatggcctctttactgcatggacttagagattatcgcggcgagccgcac
cgagttcagagtattgccgtgattgacgatgttgagtacatcgacgacagtaaaggtaca
aatgtgggcgctactcttgccgcattaaatggtctaggtgcaactttaggtgaaaagaaa
attatcctgattgctggaggtgatggtaaggggcaaaacttttcaccgttaagtgatgct
attcatcgttttgtaaaacatatctatttattgggtaaagatgctcaacaaattgaagca
gtactgaatgagaatttagtttctatttcacatgtggcaacgattgaagaagctgtagat
ctagcctccaaaattggacgtgcgggcgacaaaatattactttcaccggcatgtgcaagt
ttagatatgtttaaagattatgtacatcgtgcggaggttttcagtagtgctgtagacaat
atttcctatcaaactcacgcgattggagtgggcttatga
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