KEGG   Polynucleobacter sp. SHI2: PSHI2_02180
Entry
PSHI2_02180       CDS       T10386                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
poly  Polynucleobacter sp. SHI2
Pathway
poly00230  Purine metabolism
poly00240  Pyrimidine metabolism
poly01100  Metabolic pathways
poly01232  Nucleotide metabolism
Module
poly_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
poly_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:poly00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PSHI2_02180 (nrdA)
   00240 Pyrimidine metabolism
    PSHI2_02180 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:poly03400]
    PSHI2_02180 (nrdA)
Enzymes [BR:poly01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PSHI2_02180 (nrdA)
DNA repair and recombination proteins [BR:poly03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PSHI2_02180 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN Glutenin_hmw
Other DBs
NCBI-ProteinID: BDW10136
LinkDB
Position
212141..215119
AA seq 992 aa
MTFANPHGNLVGVNTYPASNNPNAATNQAPSAGFIAGGVGASNPVQLSDYKIIRRNGIVV
SFEPSKIAIAVTKAFLAVNGGQGAASARIREQVEQLTQVVVRGLLRSRPNGGTFHIEDVQ
DQVELALMRSGEHNVARAYVLYRDKRNQERHQAQLQTPKVSDVPHPGINVTDKGVVKPLD
MANLQSILEAACQGLGNHIVPTTILTETIKNLYEGVPIEQVFDSAILSSRTLIEKDPAYS
LVTARILMHVIRRDILGVEVAQGEMQQVYPQYFGKFLRRGVKEELLDKRVLEIFDIDRLG
KALNAERDLQFNYLGLQTLYDRYFLHVEEQRIEMPQAFFMRVAMGLSLDEKQPTDRAIEF
YEILSTFDFMSSTPTLFNSASLRSQLSSCYLTTVADDLDGIYEALKENALLSKFAGGLGN
DWTNVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEF
LELRKNTGDDRRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSSTPDLHDKFGRAFEEAY
VAYEKKADAGELKPFKRIPAAQLWRKMIGMLFETGHPWITFKDPCNIRSPQQHIGVVHSS
NLCTEITLNTNEEEIAVCNLGSVNLTAHMMTDANGQLVLDHAKLQRTISTAMRMLDNVID
INYYAVAKAKNSNVKHRPVGLGIMGFQDCLHMLRIPYASDAAVEFADTSMEAVCYYAYQA
SNELAKERGTYSTFKGSLWDRGILPQDSVELLAQERGGYLTVNNASKMDWTSLRASIKQY
GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKARGLW
DEVMIADLKYFDGSLAKIDRIPQDLRDIYATAFEVAPKWIVEAAARRQKWIDQAQSLNIY
MAGASGKTLDETYKLAWTLGLKTTYYLRTTSATQVEKSTVDKGTLNSVSNQSAEQQAASA
AALHDQALAEADGAVCTLRPGDDGFEECEACQ
NT seq 2979 nt   +upstreamnt  +downstreamnt
atgacattcgctaacccccacggcaatttagtaggtgtaaacacttatccagccagtaac
aacccaaatgcagcgacgaaccaagcaccttcagcaggatttatcgctggaggagtcgga
gcgtcaaatccagtacagctttcggactacaagattatccgtagaaatggtattgttgtt
tcctttgagccatccaaaatcgccattgccgtaacaaaggcatttttagcagtcaatggt
ggtcagggcgcggcttcggccagaattcgtgagcaagttgaacagctgacgcaggtagtt
gttcgtgggttgttgcgtagtcgtccgaatggtggaacttttcatattgaagatgttcaa
gaccaagtagagttggctttgatgagaagcggtgagcataacgtcgctcgtgcttacgtc
ctttaccgtgataaaagaaatcaagaacgtcaccaagcgcaacttcaaacccctaaagtt
tctgatgttcctcatccaggcattaatgtcactgacaaaggtgttgttaagccactggat
atggccaacttgcaatctattttagaagccgcatgtcaaggtttgggcaaccatattgtg
ccaacaacgattttgactgaaacaatcaagaatttgtatgaaggtgttccaatcgagcaa
gtgtttgattcagcaattctttcatcaagaacattaattgaaaaagatccagcctatagc
ttagttactgcccgcattttgatgcacgttatccgccgtgatattttgggcgtggaagtt
gctcaaggtgaaatgcagcaagtgtacccacaatactttggtaagtttttacgccgtggt
gtaaaagaagagttgttggataaacgtgttttagaaatatttgatattgaccgcttaggc
aaggctttaaatgctgagcgcgatttgcaattcaattacctagggttgcaaacactctat
gaccgttatttcttgcatgtggaagaacagcgtattgaaatgccgcaggcattctttatg
cgtgttgcaatgggcttatctttagatgagaagcagccaaccgaccgcgcaattgaattc
tacgaaattctgtctacctttgacttcatgtccagtacaccgacattgtttaattcagca
agtttacgttcacagttatccagctgctacttaactacagttgccgatgacttagatggt
atttacgaggcgctcaaagaaaacgccttgttatctaagtttgcaggtggattaggtaac
gattggactaacgttcgtgcacttggaagtcacattaaaggcactaatggtaaatcacaa
ggtgttgtgccgttccttaaagtagtgaacgacactgcagttgctgttaatcaaggtggt
aagcgtaagggtgccgtatgcgcctatttagaaacttggcatttagatattgaagaattc
ttggaactgcgtaaaaacacaggtgatgaccgtcgccgtacgcatgatatgaatacagcc
aactggattccagacttatttatgaagcgcgttatggaaaacggtgaatggacattgttt
tctccgtcgagtacacctgacttacatgataaatttggtcgtgcatttgaagaagcgtat
gtcgcttatgagaaaaaagcagatgcaggagagctcaagccatttaagcgtattccagct
gcgcaactctggcgcaaaatgattggtatgctgttcgaaacaggccacccatggattaca
tttaaagatccatgtaatattcgtagcccacaacaacatattggcgttgttcactcttcg
aacttatgtactgagattactctgaataccaatgaagaagaaatcgctgtttgtaattta
ggttctgtgaacttaactgcacacatgatgacggatgccaatggtcaattggttttagat
catgccaagttacaaagaacgatcagcacagcaatgcgtatgctagataacgtgattgat
atcaactattacgctgttgctaaagctaaaaactcaaatgtcaaacaccgtcctgttggt
ttaggcattatgggcttccaagattgcttacacatgttacgtatcccatacgcgagtgat
gcggctgttgagtttgctgatacatctatggaagcggtttgttattacgcttaccaagca
tcgaatgagctcgcaaaagaacgtggaacttatagtacctttaaagggtcattatgggat
cgtggtattttgccgcaagactctgttgaattattggcccaagaacgtggcggttattta
acggtgaacaatgcgagcaaaatggactggacttcattgcgcgcaagcattaagcaatac
ggtatgcgtaactccaactgtgttgcaatcgctccaacagcaacgatctcgaacattatt
ggtgtttcagcctgtatcgaaccgacattccaaaatttatatgttaaatctaatttatca
ggcgagtttacggtagtgaatgaatatttggttcgtgatctgaaagcacgcggtttgtgg
gatgaggttatgattgcagatctcaagtattttgatggatctttagccaagattgatcgt
ataccgcaagatttaagagatatctatgctacagcatttgaagtagcgccaaaatggatt
gtagaagcagcggcgcgtcgtcagaagtggattgatcaggcacagtctttgaatatttac
atggctggtgcttcaggtaagacattagatgagacgtataagttggcttggacacttggt
ttaaagactacttattacctacggacaacttctgcaactcaagttgaaaaatcgacggta
gataagggaacattaaattcagtatccaaccaatcagcagaacaacaagcagcaagtgca
gcagcacttcatgatcaagcattagccgaggcagatggggcagtttgtacattacgtcca
ggcgatgatggatttgaagaatgtgaagcttgtcagtaa

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