Polynucleobacter sp. SHI2: PSHI2_02290
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Entry
PSHI2_02290 CDS
T10386
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
poly Polynucleobacter sp. SHI2
Brite
Enzymes [BR:
poly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PSHI2_02290
Transfer RNA biogenesis [BR:
poly03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PSHI2_02290
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NCBI-ProteinID:
BDW10147
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Position
224040..226154
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AA seq
704 aa
AA seq
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MHFIFEEGGEIKGATTIGTFVPGADHYAAQTQFGKRIKLKAKDVWYQWSNQDLDKAILEA
QELATQIDMDFLWECAPEEEFQFEQVAKDYFGAGIQPAQMIALATALQSAPIYFRRKGRG
QFLRAPEEQLKAALASVERKRKEAQLQKEWEEQMLAGNLPDMIAQATQQLLWSPDKNGIV
YKALSNVSQQLSINPAQLLLQLGAIHSPLEIHQGKFLKEYFPKGPQFAADAVLSEDLWQK
IAKDLPLATVQAFSIDDAATTEIDDAFSVTPLADGKYQIGIHIAVPGLAIVPGDTLDQVA
QKRMSTVYFPGGKITMLPQSVIEIFSLNEHAARPTISLYVTTNEDGTIDLSAPPKTVLEK
TFIADNVRLGEIEHLVNETSIDDSTRSDIVYRQELSVLWRAAKQLHAQRQKIRIEHGQRE
EKLGPPEPGSLPRDFHFEIQTSNEQVLTAETLLKSPIQDQDWIPIISSRQRGSVIDSIVA
EWMIFSNQTWGSILAAHDLPAIYRAQQGWGAQRTRMQTTPCRHEGLGVENYAWCTSPLRR
YADLVNQWQLIAYVQQGVMAKLAAPFAPKDTKIMSLCAEFDATYTAYNAYQQIAEKYWSL
RWMQSKGLPWSGYVRVQKEGMVRVEPIPLRLFVPELQNAPRGARVEVEILEVDLLMLTAS
VRVIQILENQSATLEAEVEEEVPAPIVDLTQEPAASESNDSAST
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcactttattttcgaagaaggtggcgagattaaaggtgccacaacgattgggactttt
gttcctggggcagaccattatgctgcgcaaactcaatttggcaagcggatcaaactaaaa
gcaaaagatgtttggtaccaatggtcaaatcaagacttggataaagcaattcttgaagca
caagaattggcaacgcaaattgatatggattttttgtgggaatgtgcccctgaagaagaa
tttcagttcgaacaggtcgcaaaagattattttggcgcaggcattcagccagcacaaatg
attgcgttagctacagcactacaaagtgcccccatttatttccgcagaaaaggacgaggt
caatttttaagagctcccgaagagcaattaaaagcagctcttgcatctgtggaacgtaag
cgtaaagaggcgcagttgcaaaaagagtgggaagagcaaatgttggcaggtaatttacca
gacatgattgcccaagccacacagcaacttttgtggagcccagacaagaacggtattgtg
tataaagccctgagcaatgtcagccagcaactcagcatcaatccagcgcaattattactc
cagttaggggcgattcactcgccacttgagattcatcaaggtaaatttttaaaagaatac
tttcccaaaggccctcaatttgcagctgatgcagtactttcagaagatttgtggcagaaa
atagccaaggatttgccactcgcaaccgtgcaagcattttcgattgatgacgctgctaca
accgagattgatgatgcattttcagtaacaccactggcggatggaaaatatcaaatcggt
atccatattgcagttccaggtctcgcgattgttccgggagacaccttagatcaagtggct
cagaagcgcatgtctaccgtctattttcccggcggcaaaattaccatgttgccccaatca
gtgattgagatcttttcattaaatgaacatgcagcgagacccacgatttctttatacgtc
acaaccaatgaagatggcaccatcgaccttagtgcaccaccaaaaaccgttctcgaaaaa
acattcatcgctgataatgttcgattaggcgaaattgaacacctcgtcaatgaaacatcg
atagatgattctacacgtagcgatattgtttatcgtcaagagctcagtgttttatggcgc
gccgccaagcagctacatgcgcagcgacaaaagatacgcatcgagcatggacaacgagaa
gaaaaactaggtccaccagagcctgggagtttgccaagagattttcattttgaaatccag
accagcaatgaacaagtactcactgcagaaactttacttaagagtccgattcaagatcaa
gattggatacccatcattagctctcgccaacgaggttcagtcatagactccatcgttgct
gaatggatgatttttagtaatcagacttggggatcaattctcgcagcgcatgatctgccg
gcaatttaccgagcacagcaaggatggggagcgcaacgcaccagaatgcaaactacacct
tgccgacacgaaggcttaggcgttgaaaactatgcatggtgtacatcaccgctgcgtaga
tatgcggatttggtcaatcaatggcaattaattgcctatgtacaacaaggtgtcatggca
aaattagccgcaccatttgctccaaaagatacaaaaatcatgagcctttgtgcagaattt
gatgcgacctataccgcttataacgcgtatcaacaaattgcagaaaaatactggtcatta
cgctggatgcaatcaaagggcttgccttggagtggttatgtgagagttcaaaaagaaggc
atggtcagggtagagccgattcccttacgtttatttgttcctgaattacagaatgcacct
cggggagcgcgggttgaagtagaaatcctcgaggttgatttactgatgctcacggcttct
gtaagagtcatacagattctagaaaaccaatctgcaacgctagaagccgaagtagaggaa
gaagtgcctgctccgatagtagatctgacccaagaacctgctgcaagtgaaagtaatgac
agcgctagtacttaa
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