| Entry |
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| Symbol |
holA
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| Name |
(GenBank) DNA polymerase III subunit delta
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| KO |
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| Organism |
poly Polynucleobacter sp. SHI2
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:poly00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSHI2_02540 (holA)
03430 Mismatch repair
PSHI2_02540 (holA)
03440 Homologous recombination
PSHI2_02540 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:poly03032]
PSHI2_02540 (holA)
03400 DNA repair and recombination proteins [BR:poly03400]
PSHI2_02540 (holA)
Enzymes [BR:poly01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSHI2_02540 (holA)
DNA replication proteins [BR:poly03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSHI2_02540 (holA)
DNA repair and recombination proteins [BR:poly03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSHI2_02540 (holA)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
248434..249498
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| AA seq |
354 aa
MIKIDAFLTHIGQVEKNQKPLEHLYLFSTDEPLLLMQAKDRLRKMVKEKGFTERETLMQD
GQFDWSSLQSSNQNMSLFGEKKLIELTMPTGKPGREGAEVLKQFAKHILDQASQEPESIT
SIYLPKLDTQTQKSAWFSALENAGMAVRIDELDRTALPHWIKERLKSQNQQIESGEAGQR
AIAFMVDQFEGNLIAAYQEIQKLGLLYPEGVLTEEQIRDAVLHVARYDVFHLSEAFLTGD
MARINRMLDGLKGEGEALVLVVWTLSEEIRLIKSLKEGAMQGEHVPSILKARRIWGKREQ
LLPGVVQRMGMPMIDRALEMIANIDKQSKGMMAKEMPQDPWDGLRRIGGLFSWK |
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| NT seq |
1065 nt +upstreamnt +downstreamnt
atgatcaaaatagatgcttttttaacccatatcgggcaagttgaaaaaaaccaaaagccc
ttagagcacctgtatttgttttcaacagatgagcccttgctcctgatgcaagccaaagat
cgcttgcgtaaaatggtgaaagaaaaaggttttactgaacgtgaaaccctcatgcaagat
gggcagtttgactggagcagtttgcaaagtagcaatcagaatatgtccctcttcggtgag
aaaaaactcattgaactcacgatgcccactggcaagccaggccgagaaggcgcagaagtc
ttgaagcaatttgctaagcacatactagatcaagcttctcaagaaccagaaagtattacc
agtatttatttacctaaattagatactcaaacccaaaaatcagcgtggtttagtgcctta
gaaaatgctggaatggctgtccgaattgatgagcttgaccgcacagcactgccgcactgg
attaaagagcgactaaagtcacaaaatcaacagattgaatctggtgaagccggacaacga
gccattgcttttatggtggatcaatttgaaggtaatttgattgccgcttatcaagagatt
cagaaactgggattattgtatccagagggagttttaaccgaagagcagattagagatgca
gttttacatgttgcccggtatgacgtgtttcatttaagcgaagcctttttaacgggagat
atggctcgcattaatcggatgttggatggcttaaaaggtgaaggtgaagctctagtctta
gtcgtttggaccctgtctgaagagatcagactgattaaaagcttaaaagaaggggcaatg
caaggtgagcatgttccgtcgatactcaaagcacgaagaatctggggcaaaagagagcaa
ctcttgcccggagtagttcaacgcatgggtatgcccatgattgatcgcgcgttagagatg
attgccaacattgataaacaatccaaaggcatgatggccaaagagatgccacaagatcca
tgggatggattgaggcgcatcggcggtttatttagttggaaataa |
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