Polynucleobacter sp. SHI2: PSHI2_02930
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Entry
PSHI2_02930 CDS
T10386
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00521
Streptomycin biosynthesis
poly00523
Polyketide sugar unit biosynthesis
poly00525
Acarbose and validamycin biosynthesis
poly00541
Biosynthesis of various nucleotide sugars
poly01100
Metabolic pathways
poly01110
Biosynthesis of secondary metabolites
poly01250
Biosynthesis of nucleotide sugars
Module
poly_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSHI2_02930 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PSHI2_02930 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
PSHI2_02930 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PSHI2_02930 (rmlB)
00525 Acarbose and validamycin biosynthesis
PSHI2_02930 (rmlB)
Enzymes [BR:
poly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PSHI2_02930 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
BDW10211
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Position
286826..287887
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AA seq
353 aa
AA seq
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MILITGGAGFIGGNFIIDWLDQPNADSVSNLDCLTYAGNLTTLNSVRQNKNYRFFHGNIG
DKALVSNLFKEHQPQAIVNFAAESHVDRSIHGPGKFIQTNIVGTFNLLECARAYWSDLPQ
SEKSSFRFLHVSTDEVYGSLGPNDPPFTEKHPYEPNSPYSASKAASDHLVRAWFHTYGFP
VLTTNCSNNYGPYHFPEKLIPLCILNALNGKPLPIYGDGQQIRDWLYVKDHCAAIRTVLE
KGTLGETYNIGGWNEKANIDVVKQICIILDELQPRSDGKSYAEQITFVKDRPGHDRRYAI
DASKIERELGWKPAETFETGIRKTVQWYLDNPKWVEGVVSGSYRQWIDKQYTN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattttaattaccggtggtgctggatttattggtggcaacttcataatagactggtta
gatcaaccaaacgctgattcagtgagcaaccttgattgtttaacttacgctggaaatcta
actaccctaaattcggttaggcaaaataaaaattatcgtttttttcatggaaatatcggt
gataaagcattagtttccaatttatttaaagaacatcagccgcaagcaattgttaatttt
gcagctgaaagccacgtggatcgatccatccatggtccagggaagttcattcaaactaac
attgtaggaactttcaaccttttagagtgcgcaagagcgtattggagtgatttgcctcaa
tctgagaaatcctcatttagattcttacatgtatcaacagatgaagtttatggttcttta
ggccctaatgatccaccattcactgaaaaacatccatatgaacctaatagtccgtattca
gcatctaaagccgcatcagatcatttagtacgagcttggttccatacttatggattccct
gttttaaccactaactgctcaaataattatggcccttaccatttcccggaaaagctcatt
cctctatgcattctgaatgccttaaatggcaaaccccttccaatttatggcgatgggcaa
caaattagggattggctctatgtaaaagatcattgtgctgctattcgaacagtgttagaa
aagggaactttaggtgagacctataacattgggggctggaacgaaaaagctaatattgac
gtagtcaagcaaatttgtatcattttggatgagctacaaccaagatcagatggtaagtcg
tatgcagagcaaatcacgtttgtgaaagatcgcccaggtcatgatcgccggtatgccatt
gatgcatcaaaaattgaacgagagctcggatggaaacccgccgaaacatttgagacaggt
atccgaaaaactgtccaatggtatttggataatccaaaatgggttgaaggtgttgtcagc
gggtcataccgtcagtggattgataaacaatacactaattaa
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