Polynucleobacter sp. SHI2: PSHI2_03070
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Entry
PSHI2_03070 CDS
T10386
Name
(GenBank) RND transporter
KO
K02005
HlyD family secretion protein
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
PSHI2_03070
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GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
Beta-barrel_YknX
BSH_CzcB
Beta-barrel_RND
BSH_CusB
Beta-barrel_AprE
Biotin_lipoyl
BSH_YhbJ
HH_CzcB
HH_MFP_RND
Peptidase_M23
BSH_YknX
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
BDW10225
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Position
302435..303592
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AA seq
385 aa
AA seq
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MLVLISVLGAGWFFGKKYIGFSQTKYTTVSVEEGPLVATIRASGTLNPVRSVTIGTGVSG
MIRELTVDFNDRVKQGQIIAKIDQREFQAKFDQAQANYELALRNHQYNEKLMKEGFISEQ
ALITTDSALKATLGAVNLAKKSLDDTLIRSPVDGVVVKRSVEVGQTVAASLQSPEIFIIA
RNLAEMQVETSIDESDVGRIIEGQEATFTVDAFPGRIFKGKVKQIRKAPVNIQNVVTYTV
LISADNPDLKLLPGMTANARIVVEEHEKALKIPNAALRFRMPIDKNAKPATATNKDSPKP
PPRPAGGISNYRSVYVLEGDEGAAKPVRKAFRLGLSDGEYSEILPLKKDQPNELKVGDQV
IVGIEGATKQDATSNTQRSSGPRMF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgtcctcatcagcgttcttggggctggatggttttttggtaaaaaatatatcggt
ttttcccaaacgaagtacacaacggtgagtgttgaagaagggccactagttgccaccatt
cgagccagtggcacgctcaatcctgtgagatcagtaacgataggtaccggtgtttctggg
atgatccgtgaattaactgtcgactttaatgatcgtgttaaacaaggtcaaatcattgca
aaaatcgatcagcgtgagtttcaggcgaagtttgaccaagctcaggcaaattatgaatta
gctcttcgaaatcatcaatacaacgaaaaattgatgaaagaagggtttatttctgagcaa
gcattaattacgacggactcagctctgaaagctactcttggagctgttaacctggccaaa
aaatctttagacgatactttaatccgctcgccggtcgatggtgtggtcgtcaaacgcagt
gtcgaggtgggacaaaccgttgctgcaagtttgcaatccccagaaatttttatcatcgcc
agaaatttggcggagatgcaagtagaaacctcgattgatgaatccgacgtgggacgaatc
attgaaggccaagaggcgacctttacggtagatgcttttccaggaagaatctttaaaggt
aaagtcaaacaaatcagaaaggctcctgtcaatattcagaacgtcgtaacctatacggta
ttaattagtgcagataatcccgatttaaagctattgcctggtatgactgccaatgcccgt
attgtggtcgaagagcatgaaaaagccttaaaaattcctaatgcggcacttcgtttcaga
atgccaatcgacaaaaatgctaagcctgcgaccgcaacgaacaaagatagccctaaaccg
cctccaaggcctgcgggtggaatcagtaattacaggagtgtgtatgttttagagggtgat
gaaggcgcggctaaacctgttcgtaaagcatttcgtttagggctttctgatggagaatac
tctgaaatacttcccctcaaaaaagatcaaccgaatgagttaaaagtgggcgatcaggtg
attgtggggattgaaggtgctacgaagcaagatgctaccagcaatacacaacgtagtagt
ggtccacggatgttttaa
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